Strain | Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACGCATCGCGCATACCCTGAACCTGACCTTCGACAACCCGGCCTTTGTCCCCCAGGCACTGGAGTCCAGCCTGGCGGTGTCCAGCACCTCGGCCTGCAAC TCGGCGCGGCCGGCGCCGTCCCACGTGCTTCTCGCCCTCGGCCACGATGCCGCCAGCGCTGGCCGCAGCGTGCGCCTGAGCCTCGGTCGCTACACCCGCG AGGCCGACGTCGACGCGGCGGTGGCCGCCCTCAAGGCCGCGGCGGATAGTGGCGCGCCGGCGTGGCAGCCGTTCCTCGGGGTATCCAGGGCAGGCTGAGC GGCCGGCTCGACCCGCCCTCGCCGAAGCCAGGGGCTGCGGATAACCGCGAAGCGGTTATTCGCCCTGCGGCTCCAGGGGCTTTTCGTCTTTGCCGCCATT TCCCGGCAATGTGCGCTTGGCGGATCATCCAGGTTGGGTATCATGCGTCGCCATTCCCATCCACCGCCGACGGAAGTCAGGCTTTGCCTGCGTGAGCCCA
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DNA Sequence for Gene |
>IAK_RS0110995
ATGGACGATCTCTCCCCCGATTCCGCCTTGCCGCCTGCCGGCAGCGCCCAGGACAACGACGCGCCGCGCCAGTTGGTGGTCTGCATCGACGGAACCTCGA ACCGCTTCGGCGACCAGCCGACCAACGTGGTGCGCCTGTACCGCTCGCTGTCGCGCGATCCGCGCAGGGTGCTGGCCTACTACGACCAGGGCGTCGGCAC CTTCGGCCTGAAGGAAACCTTGTTCGAGTGGCAGAAGTTTCCCTCGCGGATCGCCGGCCTGGCCTTCGGCTGGGGGCTCAAGCGCAACGTCGAGGGCGCC TATCGCTTCCTCGCCGAGCACTACCGGCCCGGCGACCAGATATTCCTCTTCGGCTTTTCCCGCGGGGCCTACGCGGTGCGGGTGCTGGCCGCGATGCTGC GCGCGGTGGGCCTGATCGATGCGCACCAGCCGCACCTCTTCGACTACGCCTGGACCCTGCTCACCACCCGCATGCCGCCCCGCGACGAAGACAAGCGGGC CGGCACGCGTCGCCGCGGACCGGACTTCGGCCTGCTGGGACGCTTCCGCAAGGTCTTCGGCCGGCAGGTGAAGGTGCACTTCCTCGGCCTGTTCGACACC GTGACCTCGGTGGGCTGGGTCTACGACCCGCTGACCGTGCCGTATTCCTCGAACAACGAAATGGTCGACGTGGTCCGCCAGGCCCTGGCCATCGACGAAT GCCGCTGCTTCTTCCGGCAGAACCTCTGGTTCGGCGAGAAGGACCGCAAGTCCGACGTGTTGCAGGTGTGGTTCCCCGGCATGCACTCCGATGTCGGCGG TGGCTATGCGCCGAAGGACTCGCGGCTGGCTCTGGTGGCCTTTACCTGGATGCTCGGCGAGGCGCTGGAGGCCGGCCTGCATGTCGACCCGGCGCGCAGC CGCGACCAGTTGCGCGCACGTTCGAAGCAGGGCCCGGACCCGACCGCGCCGATCCTGCCGGTGATGACCCGGCCCTGGCGCCTGGCCGAGTGGCTGCCGC TGCTGGTCTGGGACCGCCGCAGCGGCAACCGCGCCTGGCGCTGGTCGCGTGGCCGGCCGCGCTCGCGGCCGCTGGAACCGGTCGGGCAGGAAACCCGGGT CAAGCTGCACCGTTCGGTGCAGCGGCGGCTGGACGAATGCCCCGACTACCGGCCGTGCAACCTGCCAGCGCTGGAACGCTGCGACCTCATCGACGATTCG CCGTTGCTCGACGGCTACCGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGGCTGGCCGCGATCGCGTTCAGAACCACATGCGGATACCGGCGACGAAGCGCGCCTCGTCGTCGTCCTCGCCCTCGGCGCGGGCCAGGTCGGCGCTGTT GCCGTAGGAGCGGTTCCAGGTCACCCCGATGTAGGGCGCGAACTCGCGACGGATCTCATAGCGCAGGCGCAGGCCCAGCTCGCTATCGGCAAGGCCCGAA CCGATGCCGCGGGCGGGATCGTTCCTGCCGTACAGGTTGACCTCGGCGCTGGGCTGGAGGATCAGCCGGTTGGTCAACAGGATGTCGTACTCGCCCTCCA GGCGCAGCGCGCTCTGGCCGTTCTCGCCGAGGAAGGCGGTGACTTCCGCCTCGAAGTCGTAGAGCGCCAGGCCCTGCACGCCGAACGCCGCCCAGGTCTG CGGCGAGCCGGGCTTGAAATCCTGGCGCACGCCGGCGACCAGGTCCCACCAGGGACCGATGGCGTGCCCGAACAGCGCCTGGACCTCGGCGTCCTCGGTC
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Amino Acid Sequence |
>hypothetical protein
MDDLSPDSALPPAGSAQDNDAPRQLVVCIDGTSNRFGDQPTNVVRLYRSLSRDPRRVLAYYDQGVGTFGLKETLFEWQKFPSRIAGLAFGWGLKRNVEGA YRFLAEHYRPGDQIFLFGFSRGAYAVRVLAAMLRAVGLIDAHQPHLFDYAWTLLTTRMPPRDEDKRAGTRRRGPDFGLLGRFRKVFGRQVKVHFLGLFDT VTSVGWVYDPLTVPYSSNNEMVDVVRQALAIDECRCFFRQNLWFGEKDRKSDVLQVWFPGMHSDVGGGYAPKDSRLALVAFTWMLGEALEAGLHVDPARS RDQLRARSKQGPDPTAPILPVMTRPWRLAEWLPLLVWDRRSGNRAWRWSRGRPRSRPLEPVGQETRVKLHRSVQRRLDECPDYRPCNLPALERCDLIDDS PLLDGYR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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