Strain | Pseudomonas aeruginosa 213BR 213BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTGGTGCCC GAGTCGAAGATGCCTGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAGCTGGGCGTGCCTT ACACCGACGAGGACATCGCCGGTGCACGTGAAGCCGTGAAGGGCAAAACCGAGATGGACGCCCTGGTGGCGTTCCTTCAAGGCCTGGGAACCTCTATCAA GAGCAAACGGTGAGTGTGATGGATATCGGGACTCTGCGTGGACTGGGCACCGTGGTGATCATGGTCGCCTTCATCGGCCTGGTGATCTGGGCCTACAGCG GCAAGCGCAAGAAGAGCTTCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGA
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DNA Sequence for Gene |
>IAK_RS0108305
ATGACGACCTTCTGGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATCTTCGCCACCCGCAAGGGCCAGCGCAGCA GCACCACCGACGAGACCGTGGGCCACTCCTACGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGT GTTCGCCGTGGGGTACCTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCCGACAAGGAAAAA GGCTGGACCGGCGTCCACCAGTGGGAAAAGGAAATGGCCAAGGCCGACGAGAAATACGGCCCGATCTTCGCCAAGTTCGCCGCGATGCCCATCGAGGAAG TCGCCAAGGATCCGCAGGCGGTGAAAATGGGCGGTCGCCTGTTCGCCTCCAACTGCTCGATCTGCCACGGCTCCGACGCCAAGGGCGCCTACGGCTTCCC CAACCTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAACCATCAAGACCACCATCATGGCTGGCCGCCACGCCGCCATGCCGGCCTGGGGTGAA GTGATCGGCGAGGAAGGCGTGAAGAACGTCGCCGCTTTCGTCCTCACCCAGATGGATGGCCGTAAGCTGCCGGAAGGCGCCAAGGCGGACATCGAGGCCG GCAAGCAGGTCTTCGCTACTACCTGCGTCGCCTGCCACGGTCCGGAAGGCAAGGGCACCCCGGCGATGGGCGCTCCCGATCTGACCCACCCCGGCGCGTT CATCTACGGCTCCAGCTTCGCGCAACTGCAGCAGACCATCCGCTACGGTCGCCAGGGTGTGATGCCGGCGCAACAGGAACACCTGGGCAACGACAAGGTG CACCTGCTGGCCGCCTACGTATACAGCCTGTCGCACGGCGAGAAGAGCGCCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGCTCCCTCCCCCACGACCCAGACGGCGCCGGCAACCCCGGCGCCGTTTTATTTTGTGCAAAAGAAAAGCGCGAATGGGACAATACGCGACCAAAAGTC GCACAGTTACCGCAAAAAGCCTGATAGATCAGGCGTATAATCAGTAGGCGTGCAACTATTTTCTGACCCTGTCGGCATGTACCGGCCGGGCGCCCCCCAC TGCCGTGGTACGCACTGATGAGCAAACAGATTCCCGTTCAAGACGTCACCCCGCCTGCCAAGGGCGACACCAATAACAACGATCTCTACGCCAAGCGCGA GAAGATCTACACCCGGGCCTTCACCGGTATCTTCCGCCGACTGCGCATGGTGGGCGGTGCGGCGCTCTTCCTCCTCTACTTCGGTACCGTCTGGCTCAAC TGGAGCGGCCGCCAGGCCGTCTGGTGGGACCTACCCGAGCGCAAGTTCTACATCTTCGGCGCCACCTTCTGGCCGCAGGACTTCATGCTGCTTTCCTGGC
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Amino Acid Sequence |
>cytochrome CBB3
MTTFWSLYITALTLGTLLALTWLIFATRKGQRSSTTDETVGHSYDGIEEYDNPLPKWWFMLFVGTLVFAVGYLALYPGLGTWKGLMPGYQSADEFADKEK GWTGVHQWEKEMAKADEKYGPIFAKFAAMPIEEVAKDPQAVKMGGRLFASNCSICHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMAGRHAAMPAWGE VIGEEGVKNVAAFVLTQMDGRKLPEGAKADIEAGKQVFATTCVACHGPEGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRYGRQGVMPAQQEHLGNDKV HLLAAYVYSLSHGEKSAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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