Pseudomonas aeruginosa 9BR, GW5_RS0126185
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGTACCGCGGTGATTTCGCCATCACCGAGATCCGTCCCTCGTACTACACCACCGGCGGCCGGCTGGTCGTCGAGATCCGCGCCAAGCTGGACAGCATGA CGCTGGACGACGTGGACAACCTCAGCGACGAGGAGGCAGAGCGCCTCTCTGGCAATGAGGTCGATCCGCTCGACGAAGTGCCCGCGATCCAGCAACCCAC TGTCGCACCGGCGGCACCGCCGAAGTCGCCCCAGAAACCGAAGCCTCTGCGCCCCGTCACAACCGGGGACGACGCGCCTTTCGGTATGGACCCTCCGGCT CCTGCAGAGCAGGCCGCCTCTCTGGACACAGATGCGGATGCAGAACTGTTCGGGACGGTCTGGCCGCTAGGCGAAATCGTCAAGCTGGACACCACGGTCG ACCGCAAGCGACTACGCCAACAGTGCGTGCGACTCGGCGCGCTGGGCTATGAGCTCGACTTCAAACAACAGGTGTGGACCCGCAAGGAGGCCGCATGAAC
|
|
| DNA Sequence for Gene |
>GW5_RS0126185
ATGAAATCGATCTACAACCCCCCAGGCTTCAGCGAGGAGTTGTTGCTGGTTTGCGCCTCGCTGCGCGAGGTCGGACTGGACAATCTGGCTGACCAGTTCC GCGCGGCAGTGTTCGACCGATCTGTCGTCGACCAGGCCATCATCGCACTGCGTGAGCGGGTGAAGACCCCTTCGCCGGAGCATGCGGCCGACAACGAGCC CTGGTTGTACTGCGACTGGCAGGCCAGGCAAACAGCTTACCGGCTCCTCCAGCGCCTTGAGCGCGCAACACGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGCAACACCCTACCAACCCCTGCCGGGCTCTCCCGTCAGGGAGACCTGGCCAACCACAGGAGCACACCTATGGGATGGCTTTTCTCACATCAGACGAAGG AAGACCTGCTGCGTGAGCTGCTGGCCCCAACCAGTACCTTCGCAGGCAGCACCGAGGTGCTGGCACACGCAGTCTCCGGCAATGAACTTTGGACTGTCGT AAAACAAACCTTTCACCTTGCCGGATTCTATTTCGGCAAGCCGGCCGGTCACTCGATCACCATGATCGAGCTGCACTTGCTGGACTGCTTGGCCGGGCAA TGGGGCTACAAGACCATTCCGGAAAGCGCCGGCCCGTTCTACTACGGCTGTCCGCTGGAGTTCCTGGACCTGGCTCACGATGAGATCAACCAGGAATGGC GTGAACGCCTGACGCACGAACACCAAGCCTGACCGCACCAACCACTTCCCTTGAGGGGCTCCCTCAAGGGCGCTCCTCGTCTACCACCAGGAGCACACCA
|
|
| Amino Acid Sequence |
>hypothetical protein
MKSIYNPPGFSEELLLVCASLREVGLDNLADQFRAAVFDRSVVDQAIIALRERVKTPSPEHAADNEPWLYCDWQARQTAYRLLQRLERATR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|