Strain | Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGAAGGAAAAGGCGTGGATGCGGTGTATTTCCCCTTCCACAAGGCCAACCAGTTCCTCGGCATGTCCGGCCTGCCGACGTTCCTCGCGGTGGATGTGAT GAAGCGCCCGGACGTCCCGGCTACCGTCGCTGCCTACCAGGCGCACCTGGACAGGGTGTTCGGGCGCGCCGGCTGAGTTCGACGGCGAGCCTCGTGTCGC TTCGCTGGATGGAGTGGCGGGTCGAAATCCAGGCTCTCGGGACGAGGCCTAATGGTCACGGATCCGCTATCCGGGCTTTTCTCGGCCACGACCCGCGAGT GATCCGAAATTCGATTTTTCCATCGATCCGTCGAATTAGATTTCATCGGGGACGGGCAGGAAAGGATGCTTTGCACGAATATTCGAATGGGCGCATCGTA AAATGAGCGCGCTTCGACCGTGTCGAAGCCACCCCCGACAACGTTGCCGGCAGGTCGCTCATCGACTTCCGACGCCTGCCGCCGAATTCAGGAGATTCAC
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DNA Sequence for Gene |
>GW5_RS0114370
ATGTGTCCTTGCCCTCACTCCCAGGCCCAGGGAGAAACGGACGGAGAGGCTGAGTGGCATAACGCCGCCCTGGACTTCACCCATGCGATGAGCTACGGCG ATTACCTGAAGCTGGAGAAGGTCCTGGACGCCCAGTTCCCGCTTTCGCCCGACCACAACGAAATGCTGTTCATCATCCAGCACCAGACCTCGGAGCTATG GATGAAGCTGATGCTCCACGAACTGCGGGCCGCCCGGGAGCACGTCAAGTCAGGCAAGCTCGGTCCGGCGCTGAAAATGCTCGCCAGGGTCTCGCGGATC TTCGACCAGCTGGTACACGCCTGGGCGGTGCTGGCGACCATGACGCCGACCGAGTACAACACCATCCGCCCGTACCTGGGCCAGTCTTCCGGTTTCCAGT CCTACCAGTACCGCGAGATCGAATTCATCCTCGGCAACAAGAACGCCACCCTGCTCAAGCCCCATGCTCACCGTGCCGAGCTGCTGGCGGCCCTGGAGCA GGCCCTGCATACGCCGTCGCTATACGACGAAGCGATCCGCCTGATGGCCGCCCAGGGGTTGCCGGTAAGCCAGGAGCGGCTCGCCCGGGACGCGGCGGCC GGCACCTGTTACGAGGCCTCGGTGGAGGCGGCGTGGCGACAGGTCTACCAGGCGCCGGAACGCTACTGGGACCTGTATCAGCTGGCGGAGAAACTGATCG ACCTGGAGGACTCGTTCCGCCAGTGGCGCTTCCGTCACGTGACCACGGTGGAGCGCATCATCGGTTTCAAACCCGGCACGGGCGGAACCGAGGGAGTGGG GTATCTGCGTAGCATGCTCGATACCATCCTCTTCCCCGAACTGTGGCGGCTCCGTTCCAACCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TACCGGATGAGGCGCAGCATCCGCCTGCGCCTCAGTCGTTGCCGGCGCCTCCCGCCGCCCACTCTTGCCGCAAAAGCCCCATGAGAACGACATTCCAGCG TTCCCGGCCGACCCGGGTGGCGGAGCGGCGCAAGCCTTCTTCGCGGAACCCCGCGCGTCGATAGAGATGACGGGCGGCAGCGTTCCAGTCGTACACGTTC AATTCAACGCGCTCGATGTCGGCGTCGGCGAAGGCCTCGGCGAGCAGCGCCTCCAGCATCGGCAGCCCCAGGCCCTGGCCGCGCGCGCTTGGCGCCAGGG CTATGCGAGCCAGGCGGACGACGCCGTTGCGGCGGTCGAACAGCAACTGGCAATGGCCGATGACCTGGTCATCCCGGCAAGCGCTCCAGAGCAGGCGCAG CGGCGGTCGCCGGCGGCTTTCCGCGAGGTCTTCATGCATCTGCTCGAGGCTCAGCGGATGCCGCAGGGCGGGGCCGGCCCATTGCACCAGCTCCTTTTCC
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Amino Acid Sequence |
>tryptophan 2,3-dioxygenase
MCPCPHSQAQGETDGEAEWHNAALDFTHAMSYGDYLKLEKVLDAQFPLSPDHNEMLFIIQHQTSELWMKLMLHELRAAREHVKSGKLGPALKMLARVSRI FDQLVHAWAVLATMTPTEYNTIRPYLGQSSGFQSYQYREIEFILGNKNATLLKPHAHRAELLAALEQALHTPSLYDEAIRLMAAQGLPVSQERLARDAAA GTCYEASVEAAWRQVYQAPERYWDLYQLAEKLIDLEDSFRQWRFRHVTTVERIIGFKPGTGGTEGVGYLRSMLDTILFPELWRLRSNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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