Pseudomonas aeruginosa 9BR, GW5_RS0113730

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTTTTCGCGCAGTTCTTTCTGCGCGGCGCGGAATTCGGCGTTGTACTGCCAGGAGCGTTCGCTGCCGTCCTGGGCCTGGGCAGTGGCGGCGCCGGTC GCCAGCAGGGCGGCCAGCAGCATCGGGATGATCTTCATGGCAAACCTCTCGGGTTGGCTCGTCGCCGGGGCGAGGTATTCGTCCCGTTTGAGCAAAGAGT AAGAGCGGGCGGATTACCCGAGGGTGAGTGGAAAATTACGTTTCCGATAACTTCGGCGATGCTCCGTTGCATGGCGGAGGAGTCTGCGCGAAGCGCATTA AGTGCGAGTTAAGATTGCGGAAAAGTAATCCCCGCCTCATGTCTGCGTCATTTCCCCGGTTCCAGAATCAGCCCCACGGTCAATGCCGGTTGCGGCAGGA CTGCGCGGGGGCGCGATCGACCAGAAGTTCACGCACAGCCAGCGCCGCAAGGCATGGCCGCAGAAGAAAAACAGACATGAACCGATCTGGAGCAATCGCC
DNA Sequence for Gene
>GW5_RS0113730
ATGCAAGGGGATGGAAAGAAACGACTGTGGACGCTTCCACTGCTGCTGGGCGCCGGACTGATGGCCTCGGCCGTCGCCGAGGAGAACGCCGAGCGGAGCA AGGAAGGTTTCATCGAGGGCAGCGAGGTCAACCTGCTGCTGCGCAACTTCTACTTCAACCGCGACTTCCGCAAGGGCCAATCGAGCCCGGCGGGCGGCGG CTACACCGAGGAGTGGGTGCAGGGCTTCATGGCCAACTTTTCCTCGGGCTTCACCCAGGGCACGCTGGGCGTCGGCATCGACGCCTTCGCCCAGCTCGGC GTGCGCCTGGACAGCGGCGGCGGGCGTTCCGGCGCCGGCGGTAGCGTCGACCTGCTGCCCTATGACGACCAGGGGCGGCCGCAGGACGACTATTCGCGAG CCGGCGGCGCGGTCAAGCTGCGCTGGTACGGCACCGTGCTGCGGGTCGGCGACGTGTTCCCGGAAACCCCGGTGATCCAGTACGGCAACAGCCGGCTGTT CCCCTCCAGCTTCCGTGGCTTCACCCTGGTCAACGACAGCCTGGCGAAGGGCCTGACCCTGCAGGCCGGCAAGCTGAACTCGATGACCCAGCCGAACAGC ACCAGCGGCAGCGACGACTTCTACAGCTTCTACACCGGCCGGCGCATCGACTCGCCGTGGGTCGCCTACGCCGGCGGCGACTACCAGGCCACCGAGCACT GGAGCGTCAGCCTCTACGGCAGCCGCCAGAAGGACGCCTGGGATCAGTACTACGCCGGCACCAGCTTCAACTATCCGCTGGACGACAAGCTGTCCCTGCT CGGCGGCGCCAACTACTACAAGGTCAAGGACCAGGGCAGGCAGGTGATGGGCGAACTCGACAACGACATCTGGAGCGTGCGCGGCGGCTTCGCCTACGGT CCGCACCAGGTGCTGCTGTCGTACCAGCGCAACAACGGCGACGACGACTTCGACTACCTGCGCCAGACCGACTCCATCTACCTGGACAACTCGATCCAGT ACAGCGACTTCAACTCGCCCAAGGAACGCTCGCTGATGCTCCGCTACGACCTCGACATGGCCGCCTTCGGTGTGCCGGGGCTGAGCTTCATGACCCGCTA TGGCAAGGGCTGGGACGCCGATTATTCGAATGCCAACAGCGTCTACATGCGCACCGACGCCAACGGCAACCCGCTGACCAACCAGGGCCGCTGGGAACGC GACGTGGAGGTCAAGTACGTGGTGCAGGGTGGCGCGGCCAAGGACCTGGCGTTCCGCGTGCGCCAGGCCACCGTGCGCTCCGATAGCTTCGAGTCGGACC TCGACGAAGTCCGCCTGATCGTCGAATACCCGCTGCAAGTCCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGCGCGCCGCCGCCCCGTCCGGGGCGGCGCTCTGCGACAGCCCGTTGCTGGCGGCTGCGCGGCGGCGCTGCTACTTTCCTCTGGGTAGGCGGGCCGAAG GGCGGTTCCTGGCCGGGCATGGCTTCGACCTGCCGGTGGGCGCCGCGACCCTAACCTCGGCCACGCCATTCCACCCATGCCGCCCGGGCACCGGCGTGCC CGTGGCAGCCCAGGCTACGGGCGCCGCGTAGCCAGCCAAGCGGGAGTCGACATGGCCTCGTGGACCTTGGTGGACGCCAGTGCGATCGCTGTCCGCCATC CCTACACCTTCTACAAACCGGACGCGGAGACCATCGACCGGGTCGCCGCCGGGGAAAGCGTCAAGCTGATCTTCGCCTTCGATACCGACAACCCCGATGC GCCGCACGCCGAGCGGCTCTGGGTGACGGTCGAGGGCATCGAGGCGGATGGCGCCTTCAGCGGCCGCCTGGACAACTATCCGCAATACATCCGCGACCTG
Amino Acid Sequence
>porin
MQGDGKKRLWTLPLLLGAGLMASAVAEENAERSKEGFIEGSEVNLLLRNFYFNRDFRKGQSSPAGGGYTEEWVQGFMANFSSGFTQGTLGVGIDAFAQLG VRLDSGGGRSGAGGSVDLLPYDDQGRPQDDYSRAGGAVKLRWYGTVLRVGDVFPETPVIQYGNSRLFPSSFRGFTLVNDSLAKGLTLQAGKLNSMTQPNS TSGSDDFYSFYTGRRIDSPWVAYAGGDYQATEHWSVSLYGSRQKDAWDQYYAGTSFNYPLDDKLSLLGGANYYKVKDQGRQVMGELDNDIWSVRGGFAYG PHQVLLSYQRNNGDDDFDYLRQTDSIYLDNSIQYSDFNSPKERSLMLRYDLDMAAFGVPGLSFMTRYGKGWDADYSNANSVYMRTDANGNPLTNQGRWER DVEVKYVVQGGAAKDLAFRVRQATVRSDSFESDLDEVRLIVEYPLQVL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site