Pseudomonas aeruginosa 9BR, GW5_RS0108760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02548
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF51621
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0015940 | pantothenate biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF02548
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 239 | 259 | - |
| Gene3D | G3DSA:3.20.20.60 | - | IPR040442 | Pyruvate kinase-like domain superfamily | 1 | 269 | 3.4E-97 |
| CDD | cd06557 | KPHMT-like | IPR003700 | Ketopantoate hydroxymethyltransferase | 12 | 263 | 0.0 |
| FunFam | G3DSA:3.20.20.60:FF:000003 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - | - | 7 | 271 | 1.3E-92 |
| NCBIfam | TIGR00222 | JCVI: 3-methyl-2-oxobutanoate hydroxymethyltransferase | IPR003700 | Ketopantoate hydroxymethyltransferase | 15 | 269 | 2.3E-92 |
| Pfam | PF02548 | Ketopantoate hydroxymethyltransferase | IPR003700 | Ketopantoate hydroxymethyltransferase | 10 | 264 | 1.3E-99 |
| PIRSF | PIRSF000388 | PanB | IPR003700 | Ketopantoate hydroxymethyltransferase | 1 | 272 | 1.9E-99 |
| PANTHER | PTHR20881 | 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE | IPR003700 | Ketopantoate hydroxymethyltransferase | 5 | 272 | 1.1E-90 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | IPR015813 | Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily | 10 | 269 | 2.77E-94 |
| Hamap | MF_00156 | 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. | IPR003700 | Ketopantoate hydroxymethyltransferase | 10 | 269 | 40.50177 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.