Pseudomonas fluorescens R124, I1A_003706

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCCTATTCGCGACTAAGCTGGGTATTAGTCGTGCAGTAGTCGGGCATTGCCTGGCATAAGGAAGTGGATGAACAGATTTATTGTCTTGATGGCGTTGT TGGTTTTGGCTGGCTGTACCACGAGTGCCAAGACTCATGCTGTGCGAGGTGCCAGCGGTATAGAAATTGACTGCTCTGGTCTGGGGTCGGGGTGGGAAAA ATGTCAAAGGCGCGCGGCGAAGGAGTGCAAGGGGGCGGGTTACAGGGTGATCACCCGATCTGATCAGGCGAAGGATGAAGATGAATATCCGTTTGGCTTC AATCCCGCAGGCTACGTCACTCGAACCATGCTCGTGATGTGCCGTTGAGTGTGCGCTGCTTCCGCTTGTGCTTTTGTGCACTGAAAACAGGCGTTTCGGC GCCAAGGAAGATATGTCAATCCCTGGGCTGTTCAAATTCTTCCGGGCGTGCTAAAACCTTTCAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>I1A_003706
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTACTCTCATCCAAGGATGTGGAGCTGGCCATCAAGACCATGCTTGAACAAATGT CCCAGTGCCTGGCCACCGGTGATCGCATTGAGATCCGTGGGTTTGGCAGCTTTTCTCTGCACTATCGTGCGCCGCGCGTAGGTCGCAATCCGAAGACTGG TCAGTCGGTCAGTCTGGACGGCAAGTTCGTTCCGCATTTCAAGCCGGGCAAGGAATTGCGTGACCGGGTGAATGAGGAAGAGGAGGAGGGGGTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGTCGCTATTTTTCAAGGAGTTACTCATGCGTAACCTCAAGCGCATACTTCTTGGTGTTTTTATTCTGCTGCTGGTGTTGGTGATTCTGGCGTTTGTGC TTGAGAACCAGCAGTCGGTATCGTTGTCATTTTTAGGCTTAGCTGCTCCTCAATTGCCGATTTCATTGGTTGCCGTTGTTGCCCTGCTGATTGGAATGTT GATAGGGCCGTTGCTTGGCTGGTTCTTGGCGAGGAATTCAGGAAGAGCTCGCAAGCGTTTGCTTCATTGAAGGTGTAACTGGGGCTGCTCACAGTTTGTC CATAACCAATAGTAAAACGTCGGTTAAGCTGTAAAATGCCATGTTTGTTCGATCGTGACATATCCTCACATCGATTCGGACTGACTCTGACAGAAGCATC TTGTTGATGGCTTCTGATTCATGGATTAGACGGCGTTCACTGGTGGCGTTGTCAGCAGCTCAAGGGCATGGTCTCGCGTGAAAATTCTAGTTACCGGTGG
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEEGV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site