Pseudomonas fluorescens R124, I1A_003595 (cheY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCAGTGTCGAGTCCAGTGGTCGTAAAACCAAACCGCAACTGATAGGCGTCATGAAAGTCATCCCAATTCCCGGATACCTCCAAAGGATATTTTTCAGGT ACTTTGTTTTCTGCCAGGCTGAAGCGCGAGTATATGTTGTAGTGCGTGAAAAAGAAGTAAATCTGGTCTTTGCCTGAGCGCCAGTCAACAGCGACGGCCT TTCCTAATCGAGACATGTTTAGTCCTTTAATGGTTGTTGAAAAAAACGTTTTTGTTAATCGTGTGCAGTCGATGTTAGTTGCACAGCTTGATTTTTAATA TGCCCGGTATGTTTCAATTTGAAAGTTGCGCCTGGCGGTTGTCGATCAGATTGGAACGCAGGTAGATGACCGACCCTTTACCTGACGTACTGCGGTGGTG GGGGCGGCTACGCAGCGTTTCTCTCGTTAAACGGTACACTTGGCATAACTGCGGCTTAATCTTCGGCTGCTTGAATGGCGTTTTTGCTCATGGAGCCCCC
|
|
| DNA Sequence for Gene |
>I1A_003595
|cheY
ATGCACGTACTGGTTTGTGAAGACGATGAACTGATCGCCAGCGGTATCGTGGCCGGTCTCACGGCGCAGGGCCTGACGGTCGAGCACGTCAACACCGCCT CGAAAGCACGGGCGATGCTCAAGGTCGCCGAATTCGACGTGATGGTGCTCGATCTTGGCCTGCCCGACGAAGATGGCCTCAAGTTGCTGCAACAACTGCG TCAGCAGGGTCTGGAAATTCCGGTGCTGATCCTGACCGCGCGCGACTCGGTCACCGATCGGGTCGATGGCCTGCAGGCCGGGGCTGACGATTACCTGCTC AAACCGTTCGATTTGCGGGAGCTGTTCGCCCGTCTGCAAACCCTGTTGCGCCGGGTCGCCGGACGCAGCGTCAACCTGATTGAACACGGTGCGCTGACCT ACGATCCGAGCAGCCGTGAAACCACGCTGGCCGGGAAACCGGTGGAATTGTCGCGTCGCGAGCAATCGCTGTTGCAGGCGCTGTTGCACAACCGTGGCCG GGTGCTGTCCACCGAGCAGTTGAAGGACAGCGTCTATGGCTTCAATGACGAGCTGGAAAGTAATGCGCTGAACGTGCACATCCATCACCTGCGCAGCAAG CTCGGCAAGGGTATTGTCGAAACTGTGCGCGGTCTGGGCTATCGCCTCGGGCCGGCCGATGGTGGAGAACAACAGAAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGAGTCTGCGTCTGCGCCTGAGTCTGACCCTCGGCGCCGCCTTCGCCCTGATCTGGGCGCTGGCCGCGGCCTGGATGCTCAGCGACTTGCGCAATCAGAT GATGTTTTCCCTCGACCAGCGTCTGGTAGCCTCGGCGCGCATGGTCGCCGGGCTGCTCGAGCAATTGCCGGCGCTGCCGAGCAAGGGCGAGGGCACCCAT TTCAGTGCTGAACAATTGAACATTCCCGGCGGCATGGCCTGCCAGGTCAGTTCGCTGCGTGGGGAGATTCTGGCCCGCAGCCACAGCAGCCCCGAGCAAA CCCTGGAAGCGGAAAAAATGGGCTTCCACGACCAGATGATCGACGGTGCGCCGTGGCGCAGTTTCACTCTCGCGCGGGGGGATGTGCGGATCACCACGGC CGATCGGCAGATCGAACGCGAAGCCCTGAACATGTCGATCCTGCTGGCGGCCTCGGTGCCGGTCGGCGTAGCGTTGCTCGGTTGTCTGTGCCTGTTGTGG
|
|
| Amino Acid Sequence |
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVNTASKARAMLKVAEFDVMVLDLGLPDEDGLKLLQQLRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLL KPFDLRELFARLQTLLRRVAGRSVNLIEHGALTYDPSSRETTLAGKPVELSRREQSLLQALLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRSK LGKGIVETVRGLGYRLGPADGGEQQK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|