Pseudomonas fluorescens R124, I1A_003310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCGGCGTTGTCCCAGTCGGCGATCAGGCGCCGGGCCAGCGGCAGCAGCGATTCGCCCTCGGCAGTCAGCGCCACGTTGCGCGTGTTGCGGCTGAACAGC CGCCCACCCAGCCCCTCTTCCAGCGCCTTGATGGTCAGGCTCAGTGCCGATTGCGACAGGTGCAGGCGCTCACAGGCCACAGCGAAGCTCAGGCTCTGGG CCACAGCGAGGAAGGCGCGGATCTGTTTGATGGTCATACTGGATAGCGCCCTTGCGCGATATTGCCGGATAAACGCCATAACCACTGTAGGAGCTGCCGC AGGCTGCGATCTTTTGATCTTGATCTTAAAAAACAAAATCAAAAGATCGCAGCCTGCGGCAGCTCCTACAGGGATAGCGTCAATTGTTGAGCTTTATCAA TCAATCAACCTTAAAAATCAACTTAACAAATATATCCCTCAGCGAGACACTCCAGTCATTCGGCTAGCCAGCCGCCCGACAAACAATAAAAGAGGTGCAT
DNA Sequence for Gene
>I1A_003310
ATGGCAGGTTTCGACAAGCGCGTGAGTTCCTACGAGGAAGCTCTGGCGGGTCTTGAAGACGGCATGACCGTGATTGCCGGCGGCTTTGGCCTGTGCGGCA TCCCGGAAAACCTGATCGCCGAGATCAAGCGCAAGGGCACCCGCGACCTCACCGTGGTTTCCAACAACTGCGGCGTCGATGGTTTCGGCCTCGGTGTGCT GCTGACCGACCGCCAGATCAGCAAGGTGATCGCCTCCTACGTCGGCGAAAACAAACTGTTCGAAGAGCAACTGCTCAAGGGCGACATCGAAGTCATCCTG ACCCCGCAAGGCACCCTCGCCGAGAAAATGCGCGCAGGCGGCGCCGGCATCCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTCGCCGAAGGCA AGGAAGTGCGCGAGTTCAACGGGCGCAAGTACCTGATGGAAGAGTCCATCACCGGCGACTTCGCCATCGTCAAAGGCTGGAAAGCCGACCATTTCGGTAA CGTCATCTACCGCCACACTGCGCAGAACTTCAACCCGCTGGCCGCCACCGCCGGCAAGATCACCGTGGTCGAAGTCGAAGAAATCGTCGAGCCCGGCGAG CTGGATCCGTCGCAGATCCACACCCCCGGCATCTACGTCGACCGGGTCATTTGCGGCACGTTCGAAAAGCGCATCGAACAGCGCACCATCCGCAAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAGGCTGACGGAGAATAAAAACATGGCACTTACCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAAATGCAGGACGGCTACTACGTCAACCTCGGCA TCGGCATTCCGACCCTGGTCGCCAATTACATTCCCGAAGGCATGGAAGTCATGCTGCAATCGGAAAACGGCCTGCTCGGCATGGGGCCTTTTCCGACTGA AGACACCATCGATGCCGACATGATCAACGCCGGCAAACAGACCGTGACCGCGCGCATCGGTGCATCGATTTTCAACTCCGCCGAATCCTTCGCGATGATC CGCGGTGGGCATGTCGACCTGACCGTACTCGGTGCGTTCGAAGTCGACGTCGAAGGCAACATCGCTTCGTGGATGATTCCCGGCAAACTGGTCAAGGGCA TGGGCGGCGCGATGGATCTGGTGGCCGGGGCCGACAACATCATCGTGATCATGACCCACGCTTCCAAGGACGGTGAGTCCAAGCTGTTGGCCAAGTGCAG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MAGFDKRVSSYEEALAGLEDGMTVIAGGFGLCGIPENLIAEIKRKGTRDLTVVSNNCGVDGFGLGVLLTDRQISKVIASYVGENKLFEEQLLKGDIEVIL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVAEGKEVREFNGRKYLMEESITGDFAIVKGWKADHFGNVIYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPSQIHTPGIYVDRVICGTFEKRIEQRTIRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site