Pseudomonas fluorescens R124, I1A_002558
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 62 | 230 | 1.0E-51 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 34 | 231 | 8.3E-70 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 68 | 227 | 1.0E-49 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 73 | 229 | 1.29781E-60 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 63 | 230 | 8.3E-52 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 56 | 231 | 7.1E-64 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 53 | 230 | 1.6E-58 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 72 | 230 | 1.54E-48 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.