Pseudomonas fluorescens R124, I1A_002209

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGGCAACGCTTTCTGGAGATCTGGTCGGGATTGCCAGTGCTGTACCTGCTGATCATCCTCGCCAGTTTCGTCCAGCCGAATTTCTGGTGGCTGCTG GGGATCATGCTGTTGTTCTCGTGGATGAGTCTGGTCGACGTGGTGCGCGCCGAGTTCCTGCGCGGGCGCAACCTCGAATACGTGCGCGCCGCGCGGGCGC TGGGCATGCAGAACGGTGCGATCATGTTCCGCCATATTCTGCCCAACGCCATGGTTTCGACCATGACCTTCATGCCGTTCATCCTCACCGGCGCCATCGG CACCCTGACCGCGCTGGATTTCCTCGGTTTCGGTTTGCCGGCCGGCAGCCCGTCGCTGGGTGAACTGGTGGCCCAGGGCAAATCCAACCTCCAGGCACCG TGGCTGGGCATTAGCGCGTTCGCCGTGCTGGCGTTGATGTTGAGTCTGCTGGTGTTTATCGGCGAGTCCGCTCGCGATGCCTTCGACCCGAGGAAGTGAA
DNA Sequence for Gene
>I1A_002209
ATGAATCAGGACAATCTGATCGAAGTGCGCGACCTCGCCGTCGAGTTCGGCTTGAACGAGCGGCGGCACCGAGTAGTCGAGGGCGTGAGTTTCGACATCA AGCGCGGTGAAACCCTGGCGTTGGTCGGCGAGTCCGGCTCGGGCAAATCAGTGACGGCGCACTCGATTCTGCGCCTGCTGCCCTACCCACTGGCCCGACA TCCAGCCGGCAGCATCAACTATGCGGGGCAGAATCTGCTCGGCCTGAGCGAAAAAACCATCCGCCACATCCGCGGTAACCGGATCGCGATGATCTTTCAG GAACCGATGACCTCGCTCAACCCGCTGCATTCGATCGAGAAGCAGATCAACGAGGTGCTGGGCATCCACAAGGGCCTGACCGGTAAAGTCGCAACCAAGC GCACGCTGGAGCTTTTGGAGATGGTCGGCATCCCCGAGCCGCACAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCCGGCGGCCAGCGCCAGCGAGTGAT GATCGCCATGGCCCTGGCCAACGAGCCGGAGTTGCTGATCGCCGACGAACCGACCACCGCACTGGACGTGACCGTTCAGCTGAAAATCCTCGATTTGCTC AAGGAACTTCAGGCTCGATTGGGCATGTCGCTGCTACTGATCAGTCACGATTTGAACCTGGTGCGAAGAATTGCGCATCGCGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGCGCAGAGCTGTTCCGTTCGCCGCAGCATCCGTACACTCGGGAATTGCTCGGCGCGGAGCCCAGCGGAGGCCCGGC GACCAATAAAATCGGGGCGCCGCTGCTCGAAGTCGAGAACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCCTGCTCAAGCGCACGGTGGATTACGTCAAG GCAGTGGACGGCATCAATTTCAGCCTGCCTCAGGGACAGACTCTGGGGATCGTGGGGGAAAGCGGTTCCGGCAAATCCACGCTGGGTCTGGCGATTTTGC GGCTGATCGGCAGCAAAGGCGCCATTCGCTTTGAGGGCAAACAGCTAGACTGCCTGACGCAGAACGAGGTTCGCCCGTTGCGTCGGGAGATGCAGGTGGT GTTTCAGGATCCGTTCGGCAGCCTGAGTCCGCGGATGTGCGTCAGCGACATCGTTGGCGAAGGCCTGCGGATTCACAAGATGGGCGCCGCCGCCGAGCAG GAAGCGGCGATCATTGCGGCATTGAAGGAGGTAGGTCTGGATCCGGAAACCCGGCACCGCTACCCCCACGAATTTTCCGGTGGGCAACGGCAACGTATCG CCATTGCCCGGGCTTTGGTGCTGAAACCGGCGCTGATCCTGCTGGACGAGCCGACGTCGGCGCTCGACCGCACGGTGCAGCGGCAAGTGGTGGAGCTGTT GCGTTCACTGCAAGCCAAGTACAACCTGACGTATTTGTTCATCAGCCATGACCTGGCTGTCGTCAAAGCGCTGAGCCACCAGTTGATGGTGGTCAAGCAT GGCCAAGTGGTCGAACAGGGAGCTGCGCAAGATATTTTTGCCGCCCCCAAACATCCGTATACACAGCAGTTGCTGGAAGCCGCTTTTTTGGCACCAGCCA CTGCGCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAAAGAGGAGCAACACATGGGTTTTCTCGCCGGTAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCATCCGGCATCGCTGCCGCC ATGCATCGCGAGGGCGCTGAGCTTGCCTTCACTTATCAGAACGACAAACTCAAGGGTCGCGTTGAAGAGTTCGCACAGGGCTGGGGTTCGAGCCCTGAGC TGTGCTTTCCGTGCGATGTGGCCAGCGATGAAGAAATCGCCAAGGTCTTCGAAGAGTTGAGCAAGAAGTGGGACGGCCTGGACTGCATCGTGCACTCCGT TGGCTTCGCCCCGGGCGACCAACTGGACGGCGACTTCACCGAAGCCACCACCCGTGAAGGTTTCCGCATCGCTCACGACATCAGCGCCTACAGCTTCGTG GCCCTGGCCAAGGCTGGCCGCGAAATGATGAAAGGCCGCAACGGCAGCCTGCTGACCCTGTCGTACCTGGGCGCCGAGCGCACCATGCCGAACTACAACG
Amino Acid Sequence
>microcin C ABC transporter ATP-binding protein YejF
MNQDNLIEVRDLAVEFGLNERRHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPAGSINYAGQNLLGLSEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGIHKGLTGKVATKRTLELLEMVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KELQARLGMSLLLISHDLNLVRRIAHRVCVMQRGCIVEQASCAELFRSPQHPYTRELLGAEPSGGPATNKIGAPLLEVENLKVWFPIKKGLLKRTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIGSKGAIRFEGKQLDCLTQNEVRPLRREMQVVFQDPFGSLSPRMCVSDIVGEGLRIHKMGAAAEQ EAAIIAALKEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVKALSHQLMVVKH GQVVEQGAAQDIFAAPKHPYTQQLLEAAFLAPATAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site