Pseudomonas fluorescens R124, I1A_001519 (fliN)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAACATCGTCGGCCCGAGCGAAGCGATCGTGGTCTCCACCTTCCACATCGAACTCGATGGCG GTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAGATGCTCGACGCCGGTTTCCAGTCGGACCTCGACGATCAGGACGA GCGCTGGGTCAATGCCCTGCGTCAGGACGTGCTCGATGTCGATGTACCGATCGGCGCTACTGTGGCCCGCCGCCAGTTGAAGTTGCGCGACATCCTGCAC ATGCAGCCGGGGGACGTGATCCCGGTCGAGATGCCGGAAGACATGATCATGCGCGCCAACGGCGTACCGGCCTTCAAGGTCAAGATGGGCTCGCACAAAG GCAACCTCGCGTTGCAGGTGATCGAGCCGATCGAGCGTCGCTGAAGCGCCGCTCTCACCCCCACGCATTTAACTGAATTGTTGCCCGCCGAGGACAAATG
|
|
| DNA Sequence for Gene |
>I1A_001519
|fliN
ATGAACGACGAAATGAACGCCCAGGACGATCAGGCACTGGCCGACGAATGGGCTGCGGCCCTGGAAGAGACCGGTGATGGCAGCCAGGCTGACATCGACG CGCTGCTCGCGGCCGACGCTGGCGCTGCAAGCTCCAACCGTCTGCCGATGGAAGAGTTCGGCAGCGTGCCGAAAAACAACGATCCGGTGACGCTGGACGG TCCGAACCTGGACGTGATCCTCGACATCCCGGTGTCGATCTCGATGGAAGTGGGCAGCACCGACATCAACATTCGCAACCTGCTGCAACTGAACCAGGGG TCGGTGATCGAGCTTGATCGTCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAACGGCACGCTGATCGCGCACGGCGAAGTGGTGGTGGTCAACGAGAAGT TCGGCATCCGCCTGACCGACGTGATCAGCCCAAGCGAACGCATCAAGAAGCTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTGAAACGGTTCCTGTGGGCGCTGCTGGCGCTGCCGTTGAGTGTGCTGGCCGCTGAACCGGCCGCCACGTCCGCCGCTGCGGTTGCTGCGCCGGCGATCG GCAGCGGTGTGGCCGGGCAACTGACGCAACTGGTCTTCGGCCTGTTGCTGGTGCTGGGCTTGATCTTCTTCCTCGCCTGGCTGCTGCGCCGGGTGCAGCA GTCCGGACCGGCAGGCAAGGGCCAGGTGATCGAGCTGATCGGCTCCCGCGCACTCGGTCCGCGCGACCGGTTGATGCTGGTGCAGGTCGGCAACGAACAG ATTCTGTTAGGCCTCAGCCCTGGCACCATCACCGCGCTGCATGTGCTGAAGGAGCCGGTGCCAGTGCCGAGCAGCAGCGAAAAAGCGACCCCGGAATTTG CCCAGCATCTGCTGAAGATTCTCGGCAAGGATCAGAAGGATAAGAAGTAATGGGTGCGCTACGCATCGTCTTGACGCTGGCCCTGATGCTGGCCGCGCCG
|
|
| Amino Acid Sequence |
>flagellar motor switch protein FliN
MNDEMNAQDDQALADEWAAALEETGDGSQADIDALLAADAGAASSNRLPMEEFGSVPKNNDPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|