Pseudomonas fluorescens R124, I1A_000055

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens R124 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCTTTGAACAAACCTTGAGCGAACTGGTTGAGCTTGAAGGTTTGACGCTCAGCTATTACCGAGGCTGGGACAAGGACCGGGAATTGAGTGCCGTATTGG CTGGATCCGTGCAACGGGACCAGCAAATGGGTCATACCCAGGCCGGACCGCAACGGGCTGATTTGCGTCTTAGATTGGGCGCACACAATGCCGCGGACAT CTTGTCCCGGGGTCAGCAGAAACTGGTGGTCTGTGCCTTGCGAATTGCCCAGGGGCATCTGGTGAGCCAGGCCCGACGCGGCCAGTGTATTTATCTGGTG GATGACTTGCCGTCCGAGCTGGACGAGAGCCACCGTCGCGCGCTGTGCCGCTTGCTGGAAGACTTACGCTGCCAGGTGTTCATCACCTGTGTAGATCACG AATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTCTGTTCCACGTGGAACAGGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGCA
DNA Sequence for Gene
>I1A_000055
TTGAGCGAAGAAAATACGTACGACTCAACGAGCATTAAAGTGCTGAAAGGCCTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGTGACACCGACG ATGGCAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCGATCGACGAAGCCCTCGCTGGCCACTGCGACGACATCAGCATCATCATCCACCC GGATGAGTCCATCACCGTCAAAGACAACGGCCGTGGCATCCCGGTAGACGTGCACAAAGAGGAAGGCGTTTCCGCCGCCGAGGTCATCATGACCGTCCTC CACGCTGGCGGTAAGTTCGACGACAACTCCTACAAGGTATCCGGCGGTCTGCACGGTGTAGGTGTTTCGGTCGTGAACGCCCTGTCCGAAGAGCTGGTAC TGACCGTACGCCGCAGCGGCAAGATCTGGGAACAGACCTACATCCACGGTGTACCTCAGGCGCCGATGGCGATCGTTGGCGACAGCGAAACCACCGGTAC CCAGATCCACTTCAAGGCTTCCAGCGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGAATCGTCCTCAAGGACGAGCGCAGCGGCAAGGAAGAACTGTTCAAGTACGAAGGCGGCCTGCGTGCGTTCGTTGAATACCTGAACACCAACA AGACTGCGGTCAACCAGGTGTTCCACTTCAACATCCAACGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCACAGCGCGACGGCGGTACTCACCTGGTGGGTTTCCGTTCCGCACTGACGCGTAACCTGAACAACTACATCGAGCAG GAAGGTCTGGCGAAGAAGCACAAAGTCGCCACCACCGGTGATGATGCCCGTGAAGGCCTGACCGCGATCATCTCGGTGAAGGTGCCGGATCCGAAGTTCA GCTCGCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCGGTCGAGCAGGAGATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAA CGAAGCCAAGCTGGTCGTCGGCAAGATGATCGACGCGGCCCGTGCCCGTGAAGCGGCGCGCAAGGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGTCTGCCGGGCAAGCTCGCTGACTGCCAGGAAAAAGATCCTGCGCTGTCTGAACTGTACCTCGTGGAAGGTGACTCCGCGGGCGGCTCTGCCA AGCAGGGACGTAACCGCAAGACCCAGGCGATCCTGCCACTGAAGGGCAAGATCCTCAACGTCGAGAAAGCACGCTTCGACAAGATGATCTCGTCCCAGGA AGTGGGCACGCTGATCACCGCACTGGGCTGTGGTATCGGGCGCGAAGAGTACAACATCGACAAGCTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGTACTTTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCGGAGCTGATCGAGCGCGGCTACATCTACATCGCCCAGCCGC CACTGTACAAGGTCAAGAAAGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGATGCGAGCCT GCACCTGAACGAAGAGGCCCCGGGCATTTCCGGTGAAGCGCTCGAGCGTCTGGTCAACGATTTCCGCATGGTGATGAAGACCCTCAAGCGTCTGTCGCGC CTGTACCCGCAGGAACTGACCGAGCACTTCATCTACCTGCCGGCCGTGAGCCTGGAAATGCTCGGCGACCACGCCAAGATGCAAGACTGGCTGGCTCAGT ACGAAGTACGTCTGCGCACCGTCGAGAAGTCGGGTCTGGTCTACAAGGCCAGCCTGCGTGAAGATCGTGAACGTGGCGTGTGGCTGCCAGAGGTCGAGCT GATCTCCCACGGCCTGTCGAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAGACCGTCGTCACCCTCGGCGCTCAACTGAGCACC CTGCTCGACGACGGCGCGTACATCCAGCGTGGCGAGCGCAAGAAAGCGGTCACCGAGTTCAAGGAAGCCCTCGACTGGCTGATGGCCGAAAGCACCAAGC GCCACACCATCCAGCGCTACAAAGGTCTGGGCGAAATGAACCCTGATCAGCTGTGGGAAACCACCATGGACCCAAGCGTGCGCCGCATGCTGAAAGTCAC CATCGAAGACGCCATTGGCGCAGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAACCTCGCCGTGACTTCATCGAGAGCAATGCGCTGGCGGTT TCCAACCTGGACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCAGCTCAGTGACCGCTCGGGCACCCTTCAGGGCGGCCTGCCAAAGCAAGAGAAAGCCCGCGCAAGCGGGCTTTTTTTTACGTACGATACAGCTCGATT TCTGCCTGCACATTGACGGGCGCATGACAAATGGACGTTTATCGATGAAGGATCTGGTCAAACGCTTGCCGGTCAATCTTTTACCTCTATTGATGGGCGT GCTGGCCTTTCTGATTGTCGTTGGCCCCAGAGCGCTGAATCCGCAAAACATCGCATGGCTGAGCAGTGGCGATCCGGCTACGCATTATTTGGGGTGGGTG TTCTTCAGGAATGAACCCTGGTCATTTCCTGTCGGGCTCAATCCGTCGTACGGGCTGGAACTGAGCAACGCCATCGTATTTTCGGATTCAAACCCGCTCT TTGCGTTGCTCTTCAAGCCGTTCGCAGCGTTATTGCCCGAACCGTTCCAATATTTCGGTCTCTGGTTCCTGATGTGTTTCATGCTCCAGAGTTGGTTTGC
Amino Acid Sequence
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELVLTVRRSGKIWEQTYIHGVPQAPMAIVGDSETTGTQIHFKASSETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDDGAYIQRGERKKAVTEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site