Strain | Pseudomonas psychrotolerans L19 contig00026, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGATGCGATCGAAGGCGAACACCTCCTGGGCGGCCTGCAGGGTGGTGGCGCCGTTGACCCTTACCCGACCTTCCGCGAGCAGGCGTCGGGCGAGTTGGCG GCCCAGCTCGGGTCGGTTGCCCAGCCAGCGGTCCAGGCGCATCAGCGAGGCTCGCTCGCGACGCCGGCCGCGCAGGCCGGGCAGAGGCAGCGTCGATCAC GCTCTTCCGCGGGCAGGCGTTCCAGGGCGGCGGGATCCATCGGCGTCTGCAGGCACCAGCAGTCGCGGAGCTCGCCACCGGCCGCCAGGACGCAGCTGTT GGCCTGGCCGCACAGCGGGCAGCGGGTGGGATCGAAGGGCGTGGGCGATGCGGCCATGGTGATCTCGTCGGGCGAAGCGGGCGGCAGAGTACCGGAAATT GCGACCTGGATAACGTCCGCTACGCTGGGGGTCTGCGTACTGTCGCATCCGGGGTGCAAGCTGCATCCTAGCTCCGATCGTCGGACCACCCGAGGAACCC
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DNA Sequence for Gene |
>PPL19_23561
ATGACAATAACTGCTCTGCGCACCCTGATCCGTACCCTCATTCCCGGCACCCTGCTGGTCAGCCAGCTGGCGCTGGCCACCGAAGCCGATGTCGGCCAGA CCCTGGCCCGGCAGGCCGGCATTCCCTGGCCGGCGGTGATCGCCCATCGCGGCGCCTCCTTCGACGCCCCCGAATCCACCGCCCCGGCCTACCTGGTGGC GCGGGAGCTGGGCGCCGACTACCTGGAACTCGACCTGCAGCGCACCAAGGACGGCCAGCTCATCGCCCTGCACGACGACACCCTGGAGCGCACCACCGAC GTCGCCAAGCGTTTCCCCGAGCGCGCCAAGGCGCCGGTCAGCCAGTTCACCCTGGCCGAACTCAAGTCGCTGGACGCCGGCAGCTGGTTCAACCAGGCCC ATCCCGACCGTGCCCGGCCAAAGTTCGCCGGACTCAGGATCCTCACCCTGGACGAGGTCATCGACATTGCCGAGGGCGGTCGCAACAAGCCCGGGCTGTA CATCGAGACCAAGCAGCCCAAGCTGTTTCCCGGCATCGAGCGCGATCTCAAGGCCAAGCTGACCCAGCGCGGTTGGCTCGGCAAGCCCAAGGCCGGCGCC ACCGGCGTCGCCGCCATGCCCGGGCGGGTGATCCTGCAGACCTTCGAGAAAGGCAGCCTGGAGCTCCTTCAGAAGGAGATGCCCGACACGCCGAAGATCC TGCTGCTGTGGCTGGGTGACGACTACATCCCGGCCAAGCCCGGGCCCACCTACGCCGAATCGGGCGAGGCCAGCAAGGCGGCCTACTATGCCAAGCAGCA GGTGCGCTCCGAGGGCGATTTCACCGCCTGGATCGAGTGGGCCAAGGCCCATGGCGCCATCGGCATCGGCCCCTCGGCGGCCCTTGAGGAGGGCGGCGAC CAGAGCTATGCGGACCTGGTGAAGCCCTGGATGAACGACGTCGCCCACGAGCGGGGTCTGCTGGTGCATGCCTATACGGTGGACTCGGCGGTGGACTACG CCCGTCTCGCGCCGCGTGGGGTGGATGGCTTCTTCAGCAATCGCGCCGCCGAATTGCTGAAGTTCTATGAGCGTCCGGCCAAGCAGGCACCCGCGGCCCT GCTCAAGCAGCTGGGTTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCCAGACGGGGAGGCCTGGCGGTCTCCCCCATCGCCACCGGAGGCCTCCGCATGTCCCGCCATGCCTTCAACGGCGCCAAGCTGGCGCTGCTCTGCGCC GAGCAGATCCTGGTCTATCAGCGCGATGACAAGCCCGACATCCCCTGGCCGGCTCTCTGGGACCTGCCGGGCGGCGGGCGCGAAGACGACGAAACGCCCG AGCGCTGCGCCCTGCGCGAGCTGGAAGAGGAATTCGGCCTGGTGCTGGACGAGGCGCGGTTGACCTGGGGACGTTGCTATCCACCGCGTCAGCCCGGTTA TCTGCCCAGCTGGCTGTTCGCCGGGCAGTTGCATCCCGCCGAGATCGCCGCCATCCGCTTCGGTGACGAAGGCCAGCACTGGCAGCTGATGAGCATCGTC GACTTTCTCGCCCATCCCCAGGGCGTGCCCCATCTGCAGGCGCGGCTGCGGGACTACCTGGGCGAGCGGAAGGAAAGCGGACCGGCGTCTCTTAATCCCG
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Amino Acid Sequence |
>glycerophosphoryl diester phosphodiesterase
MTITALRTLIRTLIPGTLLVSQLALATEADVGQTLARQAGIPWPAVIAHRGASFDAPESTAPAYLVARELGADYLELDLQRTKDGQLIALHDDTLERTTD VAKRFPERAKAPVSQFTLAELKSLDAGSWFNQAHPDRARPKFAGLRILTLDEVIDIAEGGRNKPGLYIETKQPKLFPGIERDLKAKLTQRGWLGKPKAGA TGVAAMPGRVILQTFEKGSLELLQKEMPDTPKILLLWLGDDYIPAKPGPTYAESGEASKAAYYAKQQVRSEGDFTAWIEWAKAHGAIGIGPSAALEEGGD QSYADLVKPWMNDVAHERGLLVHAYTVDSAVDYARLAPRGVDGFFSNRAAELLKFYERPAKQAPAALLKQLGY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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