Strain | Pseudomonas psychrotolerans L19 contig00018, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGGCGATCACCCGGGCACCCGGCGCCAGCTGGCCGTGCAGGCGGATCAGTTGCTCTTCCAGCAACGCCAGGGTCTTGGGCACCCGCACCAGCACCAGGT CGAAGGGACCGCTGATCGCCTCGCTGGCCGGGACGAAGGTCACCGCCTCGGCGGCGAGGCCGTTGCGCGCCAGGTTGGCCGCCAGCGCCAGGGCCGCCAG GTGCGAGTCGCCACTGGAGGTCACCCGGGCATGGCCGGCAAGGCTGGCGGCCAGGGCGCCGAAGCCGTCGTTGAGCACCAGCACCCGAGCGGATGGCGCC AGGCCATCCGCGGCGACCTGCTGCAGCAGGTATTCGTCGGCGGCGTCGAAGGCCTGCAGGGGATCGTCGCGGCGCGGGGGCTGACGGTCGAGTTCGAGGG TGGCGAAGGGCGAGACGAGAGAAGGCATGGTTTCTGTCGGTGTTTATCGGCGGCTCACTGCGGGACAATGGCGCCAAGCAATCGGGAAAAAGAGGCCAGT
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DNA Sequence for Gene |
>PPL19_21780
ATGACCGCCACCGAAGACAAGTTCACCCGCGAGACGATCACCGCCGTCTGGCCCTGGAGCGACAACCTCTTCAGTCTGAGGACCACGCGCGATGCGCGCT ATCGCTTTCGCGCCGGCCAGTTCGCCCGGCTGGGCGTGCGCAAGGCCGATGGCGACATCGTCTGGCGGGCCTACTCCATGGTCTCGGCGCCCCACGATGA CTTCCTCGAATTCTTTTCCATCGTGGTGCCGGGTGGCGCCTTCACCAGCGAACTGAGCCGCCTGCGCAAGGGCGACGAACTGCTGGTGGAAAAGCAGCCC TATGGCTATCTCACCCTGGAGCGCTTCGGTGGCGGTCGTGATCTCTGGTTGCTGGCCACCGGCACCGGCCTCGCGCCCTTCCTGTCGATGCTGCAGGAAC CCGATACCTGGGAACGCTTCGAGCGCATCGTGCTGGTCTACAGCGTGCGCGAAGCCCGCGACCTGGCCTACCAGGAGGTCATCCGCGGGTACGGCGAGGT GGAGCACCTCGAAGGCCTCACCGACCGCCTGGTCTATGTCCCCGTGGTCACCCGCGAGGATCATCCCGGCGCCCTGCGTGGCCGCATCACCACCCTGATC GAGAACGGCGAGCTGGAACGCGCCGCCGGCGTCGAACTCTCGCCCGAGCACTCGCGCATCCTCATCTGCGGCAATCCGGAGATGGTCGACGACACCCGCC AGCTGCTCAAGACCCGTGATCTGCAGCTGGCCCTGAGTCGCCGACCCGGGCAGGTGGCGGTGGAAAACTACTGGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGGGGCCACCACCGGCGTCTTTACGTTTTCTTCACAATTGGAAAAGGTTGGGCCTTTAGCTTTGGCCCCGCCTTGCTCTAGGATCGGAAATTCCAAGGC TACTTTCCGAGTCCCGATGAGCAGTGACAGATCCGAGCCGCCCCCGGCCCCCTGGCCAGGTGCGGCTGACACCCCCTCCCGCTCTACCCCCTCCGTGGCC GTTCGGCCCCTTCAGACGGAGGTCCGCTGCTGATGGAATGGATCGCCGATCCCACCGCCTGGTTGGGACTTCTCACCCTGATCGTCCTGGAAATCGTCCT GGGCATCGACAACCTGGTCTTCATCGCCATCCTCGCCGACAAGCTGCCGCCCGCGCAGCGTGACAAGGCACGGGTCATCGGCCTGTCGCTGGCGCTGATC ATGCGCCTGGGCCTGCTGGCCAGCATTTCCTGGATGGTGACCCTTACCGAACCGTTGTTCGAGGTCTTCGGCAAGGCCTTCTCCGGTCGCGACCTCATCA
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Amino Acid Sequence |
>ferredoxin--NADP reductase
MTATEDKFTRETITAVWPWSDNLFSLRTTRDARYRFRAGQFARLGVRKADGDIVWRAYSMVSAPHDDFLEFFSIVVPGGAFTSELSRLRKGDELLVEKQP YGYLTLERFGGGRDLWLLATGTGLAPFLSMLQEPDTWERFERIVLVYSVREARDLAYQEVIRGYGEVEHLEGLTDRLVYVPVVTREDHPGALRGRITTLI ENGELERAAGVELSPEHSRILICGNPEMVDDTRQLLKTRDLQLALSRRPGQVAVENYW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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