Strain | Pseudomonas psychrotolerans L19 contig00014, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGCTGGGCTCCGGTCCGCGCGCCGGCTTCGCCGAGGTGAAACTGCCGGCCAACGAACCGGGCAGCTCCATCATGCCGGGCAAGGTCAATCCCACCCAG TGCGAGGCCCTGTCAATGCTGGCCTGCCAGGTGATCGGCAACGACGTCACCGTGGGTTTCGCCGCGAGCCAAGGCCATCTGCAGCTCAACGTCTACAAGC CGGTGATCGCCCACAACGTGCTGGAATCCATTCGCCTGCTGGCCGATGGTTGCCGCAACTTCAACACCCATTGCGTCACCGGCATGGAGCCGGACGAGCA CAAGATGGCCGAGCACCTCGAACAGGGGCTGATGCTGGTGACGGCGCTCAACCCGCACATCGGCTACGACAAGGCCGCCGAGATCGCCAAGAAGGCCTAT GCCGAGAACAAGACCCTGCGCGCCGCCGCGCTGGAGCTCGGCTACCTGACCGATGCGCAGTTCGACGAATGGGTACGTCCGGAAACCATGCTGGAAGCCG
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DNA Sequence for Gene |
>PPL19_20066
GTGGCCGTGGCTGAGGCACGCGGCGCCACGCCGCTGGAAGGGGATGGCCGGCGCCTGCTGGTCATCCAGGGCAATCCCAAGCGGACCAGCTTCTGCCAGT CGCTGGCCGACGCCTATGTCCAGGGCGCCCAGGCCAGTGGCCAGGTGGTGCGCCAGCTCAAGCTAGCCGACGCCCAGTTCGATCCGGTGCTGCGCGAGGG CTATGACCTCTCGCAGACGCTGGAGCCGGATCTGCTGGAAGCCCAGCGGCAGATCCACTGGGCCGAGCACCTGGTGTTTATCTACCCGGTGTGGTGGAAC GGCCTGCCGGCGGTGCTGGCGGGCTTTCTCGAGCGCGTGCTGCAACCGGGCTTCGCCTTCGCCCAGCGCGACCAGACCTGGGGCGGCGAGCCGCTGCTGA CCGGCCGCAGCGCCGAGCTGCTGGTCACCTCCGACACCCCGCCCTCCCCCTGGCAGCGCCTGCGTAACCAGGCGCCCCATCGCCAGGGGATTCAGGAAGG CCTCGAGGCCTGTGGCATCCAGGTGCTGCAGGTGCACGAGTATTCGCCGGTGCGGGCGGCGGACGAGGAGCAGCGGCTGCGCTGGCTGCAGGAAGTGGAG CGGTTGGGGCGGAACGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGGTTTTTTTGATCGCGGCCATGGCGGTCCGCCGACGCGGCCGCTCCTACACGAGACGGATATTTCCGTAGGAGCGGTCGCATCGGCGAACCGCCACGA TCGCGATTCCGCCACTGCATACCAAGGCTTAAGGCATAACCAAAGCGCCTTTTATTCTTTCTCCTACGGATCTACCGTCGGCACTATCGATGCTCCCCTT CCCCCGCGCAGCACCGCCATGACCCGCTATCTCATCCTTCCCGGTTGGCAAGGCTCCGGCCCCGAGCATTGGCAGACCCACTGGCAACGCCGCCTGCCGG ATGCCCGTCGGGTCGAACAGGACGACTGGCAGCGTCCCGATCCGCAGCGCTGGGTCGCCGCCCTCGACGCGGCCATCGCCCAGGCCAATGCGCCGGTGGT GCTGATCGCCCATAGCCTGGGGTGCGTGACCGTCGCGCGCTGGGCGGCCAGCGCCCCGGTGGCCCGCCGGCAGCGGGTGCTGGCGGCCTTGCTGGTGGCG
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Amino Acid Sequence |
>NAD(P)H dehydrogenase
MAVAEARGATPLEGDGRRLLVIQGNPKRTSFCQSLADAYVQGAQASGQVVRQLKLADAQFDPVLREGYDLSQTLEPDLLEAQRQIHWAEHLVFIYPVWWN GLPAVLAGFLERVLQPGFAFAQRDQTWGGEPLLTGRSAELLVTSDTPPSPWQRLRNQAPHRQGIQEGLEACGIQVLQVHEYSPVRAADEEQRLRWLQEVE RLGRNE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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