Pseudomonas psychrotolerans L19, PPL19_17089

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas psychrotolerans L19 contig00009, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATGGTGGAGCAGGCCGAGGTCTGCGTGCAGCAGGACGATGAAGGGTGCGACGTGCGCGTGGTCAGCGGCAGCGTCGAGGTGCGGCCGCTGATGGGGCTC GGGTTGACCTTGGGCAAGGGCCAGCAGTTGCGCCTGAGTACCCTGGGCATCGGCGCCATCGAGCCGTTTTCCCCGACCCTGCTGAGCTGGCGCCAGGGCG TGCTGATCGCCCAGGACCAGCCGCTGGGCGAATTCCTGCAGGAACTCAGTCGCTATCGCCCCGGCCTGCTGCGCTGGGATCCCGCGGTGGCCGACCTCAG GGTCACCGGCAGCTTTCAGCTCGCCGACACCGAACGGGTACTGGTCCTCCTGGCCGCTACGCTGCCGGTGGAGCTGCACTGGCGTACCCGCTTCTGGGTG ACGCTGGAACCGCGCCAGGTCAACGCCTGAAAAAGCCTGTCCCCTTTTCTGCACTCGTGGGTCATTACCGGCACAGGACAACCAAAAGGAGCGGGATTCG
DNA Sequence for Gene
>PPL19_17089
ATGGTGGCATTGGTATGGCGTCCGTTGCTGCGCACGGGCTTGCTGGTGGCGTTGAGTGGTACCCCCTGGTGGGCCGGTTCGGTTGTGGCGCAGGAGGCGC TCCGTCGGCATTACGAGATTCCCGCGGGTAGTCTCGCCCAGGCCCTGACCCGCTTTGCCGCGGAGTCTGGCGTCAATCTGGCGGTGGACCCGAGTCTGGT GGGCAGTCGCTCCAGTCGCGGGCTGCTGGGTGACTATGGGGTAGAGGAGGGCTTTGCCCGCCTGCTGGCCGGCTCCGGTCTCAGGCTCCAGCCCTTGGGC CAGGACGACTTCACTCTGGTGCCGGCTGCAGAGGAGAACGGCGTCCAGCAACTGGCGGCCACCTCCATCGTCGCCTCCAGCCTCCAGGTGGAAGACGCAC CCTACGCCGGCGGCCAGGTCGCGCGGCAAGGCTCCCAGGGACTGCTGGGCAATCGCGACTTCATGGACACCCCCTTCAGCCAGACCTCCTACACGGCGCA GACCGTGCAGAATCTGCAGGCGCGTACCCTCAGCGATCTGGTCGCCAGCGACCCCTCGGTGCGTTCCACCAATCCATCGGGCGGACGCTTCGAGCAATTC ACCATCCGCGGACTCAGCCTCTACAACAGCGACGTGGCCTACAACGGCCTCTATGGTGTGCTGCCGACCTATTCCATCGACATGGAGATGGCCGAACGGG TCGATATCCTCAAGGGCCCCAGCCAACTGCTCAACGGCATCTCGCCACGCGGCAGCGTCGGCGGTGGCATCAACCTGGTGCCCAAGCGCGCCACCGACCA GCCCATCACCGAGTTCACCGGCAGCTACGCGTCCGACAGCCAGATCGGCGGCGCGGTGGACATCGGCCGTCGCTTCGGCGAAGACAATCGCTTTGGCCTG CGCTTCAACGGCGTCAAGCAATCCGGCGACACCACCTGGGATCACCAGCACGTCGATCGCCAGCTGGGTGTGCTCGGACTGGACTATCGCGTGGAGCGCC TGCGCCTGCGCCTGGGTCTGGATCTCGGCCATACCGAGCGCGACACCGACGCGCCCCAGGAGCGGGTGCTGGTGGGGGCCAACGCCCGGGTACCCGATGC CGACGACGTGCGCCACAACTATGCCCAGCGCTGGACCCGCGCCCAGACCAGGGACACCTTTGGCGCCCTGCGCGGCGAATTCGACGTCGACGACTCGCTG ATGGTCTATGGCGCCGTGGGCGCGCGTCGCAGCGATCACGATTTCCTCCGCCACAACGTCTCCATCACCAACAACGCCGGCGATTTCAGCGTCCAGCCGC GGGATTTCACCCGGGACGAGAACGTGCGCACCGCCAACGTCGGTGCCCGCAAGTGGCTGCAGACCGGACCGGTCAGCCACGAGCTCAACGTCAGCGCCGA CTACTTCTACATGGATTTCGAGAACGGCGGCGGGCGCTACGCCAGTGGGCCGAGCAACCTGTACAACCCCAGTGACCTGCCCGCGCCCGGGATCCAGACC CGCTCCGACGGCAAGGACTACACCGAGAACCGCTTCAGTGGCGTGGCCCTGGCCGACACTCTGGGCTTTTTCGACGATCGCCTGCTGGTGACCCTCGGCG CCCGCTGGCAACGGGTCAAAGTAGACGACTGGTCCGATGGCGTGAAGCAGGCCACCGCCTACGACGAGGAAAAGGTCTCGCCGTCGGCGGGCGTGCTGTT CAAGGCCAGCGAGCGGCTGTCGCTCTATGCCAGCTACATGGAGGGCTTGAGTCAGGGCAAGATCGCGCCCTCATCCGCGATCAACGAAGACCAGATCTTC CCGCCCTTCGTGAGTCGCCAGGCGGAAGTGGGCGCCAAATACGACTTCGGCACGGTGGCCGTCACCGCCAGCGTCTTCCGCATCAAGCAGCCGGCCTACG AGACCAATGCCACCAGCCGGGTCTTCGGCCCTAATGGCAAGCGGGTCAACGACGGGGTGGAGCTGAACGTGTTCGGCGAGCCGCTGGCGGGATTCCGCGT GCTTGGCGGCCTGATGTACATCGACAGCGAGCTCAAGGATACCGTGGGTGGCGCCGTCGACGGCAATCGCGCCCCGGCCACGCCCAGGCTCAATGCCAAC CTCGGCGCCGAACTGGACATCCCGGCGGTGCCGGGGCTGACCCTGACCGGGCGGGGCATCTATACCGGTTCCCAGTACCTGGACCAGGCCAACAGCAAGC GAATCGATGCCTGGCACCGCTTCGACGTGGGGGCGCGCTACGCCTTCAAGGTCGACGCCACCCGGGTAACCCTGCGAGCCTCGGTGGAAAACGTGATGAA CGAGCGCTATTGGGCCTCGGCGGGGGCTCCCGACGATGCCGAGCCGGGGCTGACGATTTCTACCCCGCGTACTCTGGTGCTTTCGACCAGCCTGGCGTTC TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCCTTGACGTTGCATCGTCGTGGCACATCCGGACTGACCCGTCGGCAACTGCTCACGCACGGCGGCGTGCTCGCCACCGGCCTGGCGCTGCAGCCGGG TGTTGCCCGGGCGCAGCCAACCCGGGTGGCCACGCTGTTCCAAGGCGCCACCGACAGCGCCGTGGCCCTGGGGCTCAGGCCCTGCGGGGTAGTCGAGTCC TGGAGCGAGAAGCCCGTCTATCGCTACCTGCGCCCGGCGCTGGCGGGGGTGCCCTCGCTGGGCCTGGAAACCCAGCCAAGTGTGGAGGAACTGGCGCTGC TGGCGCCCAACCTGATCGTCGCCTCGCGCTTTCGCCATGGCCGGATCGCGCCGTTGCTGCAGCAGCTGTGCCCGGTGGTGATGCTGGAGGAGGTTTTCGA ATTCAAGCAGACCCTGCTGGCCCTGGGCACCGCCGCGGGGCATGAAGCGGAGGCCACGGCCCTGCTGCAGGCCTGGCAGGCGCGCATCGCCCACCTGCGC
Amino Acid Sequence
>TonB-denpendent receptor
MVALVWRPLLRTGLLVALSGTPWWAGSVVAQEALRRHYEIPAGSLAQALTRFAAESGVNLAVDPSLVGSRSSRGLLGDYGVEEGFARLLAGSGLRLQPLG QDDFTLVPAAEENGVQQLAATSIVASSLQVEDAPYAGGQVARQGSQGLLGNRDFMDTPFSQTSYTAQTVQNLQARTLSDLVASDPSVRSTNPSGGRFEQF TIRGLSLYNSDVAYNGLYGVLPTYSIDMEMAERVDILKGPSQLLNGISPRGSVGGGINLVPKRATDQPITEFTGSYASDSQIGGAVDIGRRFGEDNRFGL RFNGVKQSGDTTWDHQHVDRQLGVLGLDYRVERLRLRLGLDLGHTERDTDAPQERVLVGANARVPDADDVRHNYAQRWTRAQTRDTFGALRGEFDVDDSL MVYGAVGARRSDHDFLRHNVSITNNAGDFSVQPRDFTRDENVRTANVGARKWLQTGPVSHELNVSADYFYMDFENGGGRYASGPSNLYNPSDLPAPGIQT RSDGKDYTENRFSGVALADTLGFFDDRLLVTLGARWQRVKVDDWSDGVKQATAYDEEKVSPSAGVLFKASERLSLYASYMEGLSQGKIAPSSAINEDQIF PPFVSRQAEVGAKYDFGTVAVTASVFRIKQPAYETNATSRVFGPNGKRVNDGVELNVFGEPLAGFRVLGGLMYIDSELKDTVGGAVDGNRAPATPRLNAN LGAELDIPAVPGLTLTGRGIYTGSQYLDQANSKRIDAWHRFDVGARYAFKVDATRVTLRASVENVMNERYWASAGAPDDAEPGLTISTPRTLVLSTSLAF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site