Strain | Pseudomonas psychrotolerans L19 contig00009, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGATGGCCCAGGCCATGCGCCTGGCGCAGCAGCACGCCAGCGAGACCAGCCACGGCCATGGGCACAGCGGCATGGGCACCACGCTGTCGGCCAATGCCC TGGCCATGCGCTGCCTGCGCGTCAGCCTGGAAGAAGTCATGACCCCGGCCGCCTATGCGCGGATGCTGCCGCTGGCGGCGCGACTGGCCGCCGGCCTGCG CGAGGTGATCGCCCGCCATGGCCTGGCCTGGTCGGTGACCGAACTGGGCGCCCGCTGCGAATTCCAGTTCTGCGCCACGCCGCCCACCACCGGCGCCGAG GCGGAAGCCGCCTTCCACGACAGCCTGCAGCAGGCGCTGCACCTGTACCTGATCAACCGGGGCATCCTCATCACCCCCTTCCACAACATGACCCTGTGCT GCCCGGATCTCGAAGCGGCGGACGTCGACCGCCTGCTGGCCACCCTCGACCAGGGCCTCGGCGAACTCCTGGCGCTGCCCGGCGCCCGGGAGTGCCAGCC
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DNA Sequence for Gene |
>PPL19_17039
ATGAACTTCGCCGACGCCCAGGAAGCCCGCGACTTCCTCGCCGCCCACCCCGAGGTGCGCAGCATCGAACTCATGCTGATCGATGCCAATGGCGTGCCGC GCGGCAAGCTGCTGCACCGTGACGAACTGCTGGCCATCTACGAGGAGGGCCGGCCGCTGCCCAGCTCCATCCTGGCGCTGACCCTGCAGGGGGAAGACGT CGAAGCCACCGGCCTGGTCTGGGAGGTCGCCGATGTCGACTGCTGGACCTATCCGCTGCCCGGCAGCCTGACCCTGCAACCCTGGCGCAGCACCCCGACC GGTCAGGTGCAGGTGAGCATGCACCCGACCCAGGGGCTGCCGGCCACCCCCGCCGATCCCCGGCATGCCCTGGTGCGGGTGATCGAGCGGCTGCAGGCCG ACGGCTTCCAGCCGGTGATGGCGGTGGAGCTGGAGTTCTATCTGCTCGACCGCACCCGTGACGCCCAGGGCCGGCCGCAACCGGCGCTGCAGATGAATGG CGTGCGACCCGGCTCGCCGCAGGTCTATGGGGTCTACGAACTGGAGCAGCTGCAGCCCTTTCTCGATGACCTCTACGCCGCCTGCGAGGTACAGGGCCTG CCGGTGCGCACGGCCATCTCCGAATACGCCCCCGGCCAGCTCGAACTGACCCTGCTGCACCGCGGCGATGCTCTCCAGGCCATCGACGAGGGCATTCGCT ACAAGCGCCTGGTCAAGGGCGTGGCCAACCGTCATGGCCTGCAGGCCTGCTTCATGGCCAAACCGTTCGGCGACCAGGCCGGCAGCGGCCTGCACCTGCA CGTCAGCCTCGCCGACGCCGCGGGCAACAACCTCTATGCCAGCGAGGATCCGCAGGGCACGCCGCTGCTACGCCACTCCATCGGCGGCATGCAGCACCGG ATGCTGGATGCCCTGGCGATCTTTTGTCCCAACGCCAACTCCTACCGCCGCTTCCAAGCCAACAGCTATGCGCCGCTGGCCAAGAGCTGGGGGGTCAACA ACCGCAGCGTGTCCCTGCGCGTACCTGGCGGTCCGGCCAGCAGTCGCCACATCGAGCACCGCATCTGCGGCGCCGATGCCAATCCCTATCTGGCGGCCGC GGCCATCCTCGCCGCCATCCATGAAGGCATCCGTGACGAGCGCGACCCGGGGCCGGCCACTGTCGGCAACGGCTACGAGCAGGCCACCGACTTCCTGCCC ACCGACTGGCTGACCGCGCTGCAGGCGCTGGAGCGCTCCAGCTGGATCCGGGAGGCATTGGGGGAGCGCTTCGTCGAGGTGTACCTGGCCATCAAGCGCG CGGAATACCGGCAATTCATGGCCGAGGTGGGTGAGCAGGACTGGCGCTGGTACCTGACTCACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCGCGCTTCAGGGCGCCAGGCTGGCCTGCCAGCGCCTATCCCGGGTCGAGGGCCGCCGGTGCAGCCGCTCGTCCAGCAGCGCCGCGGCCCTGGCCTGT TCACCCCCGCGCAGCAGGGCGACCAGCAGGGTGTCTTCGATGACCTCGCGCTGGGCGCCACTGCCGCCAATACGAGCGACGTCCCCGCGTAGCGGCTCCA GCAGCCGGGCACAACCCGGGTAGTCTTCTTCGGTAAAAGCCAGCAGGGCGCGGCAGAGCAGGGGGACCACCGGCCCGGCGGCCAGGGCGCCGTCGCGCAG ACGACTTTCCAGCCCCGCAATACGGGCTTCCAGCGCCAGCCGATCCCCAGTCGCCGCAGCGATCAGCGCCATATGGACGTCGGCGAAGGCCAGCCCCGGT TGCTGGAACAGCCCCTCCGCACTGGCGGCGGTAGCCTGCCAGAGCTCGGCGGGCACCTCATGGCCATAGAGTCCCAGGCGCCAGAGAAAGGAGGCGTTGT
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Amino Acid Sequence |
>glutamine synthetase
MNFADAQEARDFLAAHPEVRSIELMLIDANGVPRGKLLHRDELLAIYEEGRPLPSSILALTLQGEDVEATGLVWEVADVDCWTYPLPGSLTLQPWRSTPT GQVQVSMHPTQGLPATPADPRHALVRVIERLQADGFQPVMAVELEFYLLDRTRDAQGRPQPALQMNGVRPGSPQVYGVYELEQLQPFLDDLYAACEVQGL PVRTAISEYAPGQLELTLLHRGDALQAIDEGIRYKRLVKGVANRHGLQACFMAKPFGDQAGSGLHLHVSLADAAGNNLYASEDPQGTPLLRHSIGGMQHR MLDALAIFCPNANSYRRFQANSYAPLAKSWGVNNRSVSLRVPGGPASSRHIEHRICGADANPYLAAAAILAAIHEGIRDERDPGPATVGNGYEQATDFLP TDWLTALQALERSSWIREALGERFVEVYLAIKRAEYRQFMAEVGEQDWRWYLTHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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