Pseudomonas psychrotolerans L19, PPL19_16250 (mdoG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas psychrotolerans L19 contig00008, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGATGACGAGGCCGCCTGCAGTCGCATGCTCAAGCGACTGCTGGAGTACCGGGTGTTCGCCGACGGCGAGCAGCGCATGAATCTGTCCCTGCAGGACGT CGGCGGCGGCTTGCTGCTGGTCTCCCAGTTCACCCTGGCTGCCGATACCCGCAGCGGCCGCCGGCCGAGCTTTTCCAGCGCCGCGCAGGCGGCCCAGGGC GAGAGGCTGTTCAACCATCTGGTAGGCCTCGCCCGCGACCTTCATCCCGAGGTCCAGACCGGTCGTTTCGGCGCCGACATGCAGGTTTCCCTGGTCAACG ACGGACCAGTGACATTTTTATTGTCGATTTAGTGAGGGCGCCCCTTACAGCGCCCTGCCAAGTGTCTATGATTGCGCAGTTCGAGTTTGAACGGTCGTCC AACTGGGGAATCATTGACCCCTGCGGGAGTCGGACCTCTGCCTATCCGTTTCGCGACCACCCGTCGCCAAACGTATTCGTACGCTGATTTAGGAGGCTGC
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| DNA Sequence for Gene |
>PPL19_16250
|mdoG
GTGTTATCTCATTCCAAAGTTAAGCCGGGCAAGCAGGGCTTCGCCCTGATCGGGCTCTCCGTCGCTCTGGGTCTGTTCAGTGCCCAGGCCCTGGCCTTCA GCCTGGACGACGTGGCCGCCAAGGCCAAAGAACTCTCCGGCCAGAAATTCGTCGCGCCCAAGAGCAACCTGCCCGCATCCTTCAGCGGCATGAAGTATGC CGACTATCAGCAGATCACCTTCAATCAGGACAAGGCCTATTGGAAGAATGCCAAGACGCCCTTCCGCCTGAATTTCTATCACGAGGGCATGCACTACAGC GTGCCGGTGAAGATCAACGAGGTCACCGCCAACAATGTCGAAGAGATCAAATACGATCCCTCGATGTTCAACTTCGGCAACCTGCAGGTCGACCAGGCCC AGCTCAAGGATCTCGGCTTCGCCGGATTCAAGGTGCTCTATCCGCTGAACAAGGCGGACAAGCATGACGAGCTGATGACCATGCTCGGCGCCAGCTATTT CCGCGTGATCGGCAAGAACCAGGTCTATGGCCTGTCCGCCCGTGGCCTGGCCATCGACACCGCGCTGCCGTCCGGCGAGGAATTCCCGCGCTTCACCGAA TTCTGGGTCGAACAGCCCCAGTCGGATCGCCGCAACCTGGTGATCTATGCGCTGCTCGATTCGCCGCGCGCCACCGGTGCCTATCGCTTCGTGCTGACTC CCGGCAAGGACAGCACCGTCGACGTCGAAGCCAAGGTGTTCCTGCGCGACAACGTCAACAAGCTGGGTATCGCGCCGTTGACCAGCATGTACCTGTTCGG CCCCAACCAGCCGAGCGCCCAGGTCAACTATCGTCCGGCACTGCACGACTCCAACGGTCTGGCCATCCATGCCGGCAACGGCGAGTGGCTGTGGCGTCCG CTGAACAACCCGCGCCGCCTGTCGGTCAGCACCTACACCATCGAGAATCCGCGCGGTTTCGGTCTGCTGCAGCGTGGCCACGAGTTCTACAAGTACCAGG ACCTGGACGAGCGCTACGAAAAGCGTCCCAGCGGCTGGGTAGAGCCCAAGGGCGACTGGGGCAAGGGTCACGTCGAGCTGGTGGAAATCCCCACCCCGGA CGAGACCAACGACAACATCGTAGCCTTCTGGACGCCGGACACCCTGCCGGAGAAGGGCCAGCCGATCGATGTCAGCTATCGCCTGCACTTCACCACCGAC GAACCCAACCTGCACACCAAGGACCTGGCCTGGGTCTCCCAGACCCGTCTGTCCACCGGTGACGTGCGCCAGTCCAACCTGGTGCGCCAGACCGATGGCA GCCTGGCCTACATCATCGACTTCGAAGGTCCGAACCTCGATGACCTGCCCGAGGATTCGCAGGTCGGCTCCCAGGTCAGCCTGGATGCCAACGGTGAACT GGTCGAGAACTCTGTGCGCTACAACCCGGTTACCAAGGGCTATCGCCTGACCTTGAGACTCAAGGTCAAGGATCAGACCAAGCCGGTGGAAATGCGCGCC AACCTCGCCCAGGGTGACAAACCGCTCAGCGAAACCTGGACTTACCAGCTACCTGCCAATGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACCACCCGCGATACCTCGGTCGCCGCTGCTGGCGACTACCTCGAACACCTGCCGTTGCCCGCCGGGCAACGGCAGGTGCTGGACCAGACGGCGGACGTC GAGTCGCTGCACCGGCACCTGGCCGGTGCCCGCGGCGAAGGCGCCCAGGGTGCCGAGGCGGTGATCGCCTCCACCGAAGCGCGTCTGGCCGCCGGTTGGG ACGATACCCTGGAGGATGGCGAGCTGCTGGGCAGCGATGCCCAGGGTCGCGTCTTCATCAAGGCCACCCCGCCCATGACCCGCTCCATGATGGTGCCTGA TCCCTGGCGCACCAATCCCGTGGCGCGGAGCTGGAAGCGGCTGCTCGGCCGCAAGGATCACAGCCGTTGGCAACCCGATCCCGAAGCCGATGCCCATGCG CACTGGCGCAAGGTCGGTTCCTTCCGGCGCTTCATCCTGCTGATCCTGATGCTGGTGCAGACCGGCATCGCCACCTGGTACATGAAGGCCGTGCTGCCCT
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| Amino Acid Sequence |
>glucan biosynthesis protein D
MLSHSKVKPGKQGFALIGLSVALGLFSAQALAFSLDDVAAKAKELSGQKFVAPKSNLPASFSGMKYADYQQITFNQDKAYWKNAKTPFRLNFYHEGMHYS VPVKINEVTANNVEEIKYDPSMFNFGNLQVDQAQLKDLGFAGFKVLYPLNKADKHDELMTMLGASYFRVIGKNQVYGLSARGLAIDTALPSGEEFPRFTE FWVEQPQSDRRNLVIYALLDSPRATGAYRFVLTPGKDSTVDVEAKVFLRDNVNKLGIAPLTSMYLFGPNQPSAQVNYRPALHDSNGLAIHAGNGEWLWRP LNNPRRLSVSTYTIENPRGFGLLQRGHEFYKYQDLDERYEKRPSGWVEPKGDWGKGHVELVEIPTPDETNDNIVAFWTPDTLPEKGQPIDVSYRLHFTTD EPNLHTKDLAWVSQTRLSTGDVRQSNLVRQTDGSLAYIIDFEGPNLDDLPEDSQVGSQVSLDANGELVENSVRYNPVTKGYRLTLRLKVKDQTKPVEMRA NLAQGDKPLSETWTYQLPANE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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