Pseudomonas psychrotolerans L19, PPL19_15689

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas psychrotolerans L19 contig00007, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGGGCCCGCGCCTGGATCGTCTGGACTCGGCGCGCATCGGCAGCTCCCGCGCCATCACCCAGCTGATCCTCAACCTGGTGGAAGGCACTCCGATCAAGC TGGTCGACGGGGGCGCCCAGAAGCGCTGCTTCACCGACGTCGACGACGGCATCGAGGCGCTGTTCCGCATCATCGAGAACCAGGGCGGTCGCTGCGACGG CCAGATCGTCAACATCGGCAACCCGGACAACGAAGCGAGCATCCGCGAACTGGCCGAAGAGCTGCTGGCGCAGTTCGAGGCCCATCCGCTGCGCCATGAA TTCCCGCCCTTCGCCGGCTTCCGCGAGGTGGAGAGCAAGAGCTTCTACGGCGACGGCTACCAGGACGTGGCCCACCGCAAGCCCAGCGTGGAAAACGCCC GTCGCCTGATCGACTGGCAGCCGACCACCGCCATGGCCGCCACCGTCGGCAAGACGCTGGACTTCTTCCTGCGCGAAGCCCTGGCGCAGCGGGAGGCCTG
DNA Sequence for Gene
>PPL19_15689
ATGAACACCCTGATCCCGGCCAGCCTGCGCATCGACGTGGACACCTATCGCGGCACCCGCGAAGGGGTACCGCGGCTGCTCGACCTGCTGGACGAAGCCG GGGTCAAGGCCACCTTCTTCTTCAGCGTCGGGCCGGACAACATGGGGCGCCACCTCTGGCGCCTGGTGAAGCCCACCTTCCTGTGGAAGATGCTGAGGTC CAAGGCCGCCAGCCTCTATGGCTGGGACATCCTGCTGGCCGGCACCGCCTGGCCGGGTCGGCCCATCGGTCGCGACCTCGGTCACCTGATGCGCGAGACC CGCGCCCGCGGCCACGAGGTCGGCTTGCACGCCTGGGACCACCACGCCTGGCAGGCCCATACCGGCAGCTGGAGCCTGGAGCGCCTGGGCGCCGAATTCG GCCGTGGCCTGCAGGCCCTGGAAGACATCCTCGGCGCCAGGGTCGACTGCTCCGCCGCCGCCGGCTGGCGCGCCGATCCGCGCGTGGTGCTGGCCAAGGA GGCCTTCGGCCTCAGGTACAACAGCGATTGTCGCGGCAGTGCGCTGTTTCGCCCGCGGCTGGGCAACGGCAGCCACGGCACCCCCCAGGTGCCGGTGGAC ATGCCGACCTTCGACGAGGTGGTCGGCCCGGAACTGGCCGCCGGTGACTGGAACAGCTATCTGCTCAAGCGCTTCCGTCCGGGGGCGCTCAACGTCTACA CCCTGCACGCCGAGGTGGAAGGCATCGCCTTCGCCGACGACTTCCGCGCCCTGCTCAAGGCCGCGCGGGAGCAGGGCATCCTGTTCCTGACCCTGGGCGA CCGCCTGCCGGCCGATCCGCGCCAGTTGCCCGCGGGCAACCTGGTGCGTGGCAGCCTGGCCGGCCGCCAGGGCTGGCTGGGCGTGCAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCGGCGTCGCCTGTGGATGCTGCTGCCGCTGGCGCTGCTGGCCTATGCCCTGCCGCTGGCCTGGCGCGGCCTGTGGATTCCGGACGAGTCGCGCTATGC GCAGATCGCCCAGGAGCTCTGGCGGCGTGGCGACTGGGTGGTGCCGCACTTCCTCGGCCTGCCCTATTTCGAGAAGCCCATCGGCGGCTACTGGACCCAG GCCATCGCCCAGGCCTGGCTCGGTGACTCGCTGTTCAGTGTGCGCCTGGTGCCACTGCTGGCCAGTCTGGCCACCGCCGCCCTGGTGGTGCGCCTGACCC GGCTGATCTGGCAGGACCGCCCGCTGGCGCTGCTCGCCGGGGTGGTCTATCTCTCCTGCGTGGCCGTGGCGGGGCTGGCCACCTACGTGACCCTCGACGC CCAGTTCGCTTTCTGGATGGCCCTGGCGCTGCTCGCGCTCTGGCAGGCCCAGGCCGCCGAGACCCGCGGCGCGGCCCTGGTGCAATGGGCGCTGCTGGGG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MNTLIPASLRIDVDTYRGTREGVPRLLDLLDEAGVKATFFFSVGPDNMGRHLWRLVKPTFLWKMLRSKAASLYGWDILLAGTAWPGRPIGRDLGHLMRET RARGHEVGLHAWDHHAWQAHTGSWSLERLGAEFGRGLQALEDILGARVDCSAAAGWRADPRVVLAKEAFGLRYNSDCRGSALFRPRLGNGSHGTPQVPVD MPTFDEVVGPELAAGDWNSYLLKRFRPGALNVYTLHAEVEGIAFADDFRALLKAAREQGILFLTLGDRLPADPRQLPAGNLVRGSLAGRQGWLGVQA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site