Pseudomonas psychrotolerans L19, PPL19_14405 (rplF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas psychrotolerans L19 contig00006, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTCTAGAATGCTCGGCTCGCCCGAATCGGCCTATTGCCGAGGGGTGATTTTGAGAGCCGGTAGGCTCAATTTCTGTATTAGGAGCTAATAGCCCATGA GTATGCAGGACCCGTTAGCAGACATGCTAACTCGTATCCGTAATGCCCAGATGGCTGAAAAGGCCGTTGTGAGCATGCCTTCTTCCAAGCTGAAGGCTGC CGTCGCCAAAGTCCTCAAGGACGAAGGTTACATCGCGGATTTTCAGGTCAGCGCGGAAGCCAAGCCGTCGCTGTCCATCGAGCTGAAGTACTTCGAAGGC AAGCCTGTCATCGAAGAGCTGAAGCGTAGCAGCCGTCCCGGTCTGCGCCAGTACAAAGCCGTTGACCAGCTGCCGAAAGTGCGTGGCGGTCTGGGCGTGT CGATCGTTTCCACCAACAAAGGTGTGATGACTGATCGCGCAGCCCGTGCTGCTGGTGTTGGCGGCGAAGTGCTCTGCACAGTCTTCTAAGGGGAATCAGC
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| DNA Sequence for Gene |
>PPL19_14405
|rplF
ATGTCTCGCGTTGCTAAAAACCCTGTAAGACTGCCTGCAGGCGTCGAAGTTAATCTGGCCGGTCAGGCCCTTTCGATCAAGGGTGCCAAGGGCGCTCTGG AACTGAAGGTTCATCCGTCCGTTGAAGTCATTCAAGAGTCCGGTGAGCTGCGTTTCGCTGCTCGCAATGGCGATCAGCAGACCCGTGCGATGGCCGGCAC TACCCGTGCCCTGGTCAACAACATGGTGGTCGGCGTCAGCCAGGGCTTCGAGCGCAAGCTGCAACTGGTCGGTGTGGGCTACAAGGCCCAAGCCAAAGGT CAGGTGCTGAACCTCGCTCTGGGCTTCTCTCATCCCGTGGACTACGACCTGCCGCAAGGCATCACCGCAGAAACCCCCAACCAGACCGAAATCCTGATCA AGGGTATCGACAAGCAGCTGGTCGGCCAGGTTGCGGCTGAGATTCGTGGTTTCCGTCCGCCGGAGCCTTACAAGGGCAAGGGCGTACGGTATGCCGACGA AGTCGTCCACCGTAAAGAAGCCAAGAAAAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCATAGCAAATGACCGTCAAGAAAGAAACCCGACTGCGTCGCGCTCGCAAGGCTCGCCTGAAGATGCGCGAGCTGGAAGTGGTGCGTCTGTGCGTGTAC CGCTCTTCCCAGCACATCTATGCCCAGGTCATCGCGGCCGACGGCAGCAAGGTCCTGGCCAGCGCTTCTACGCTGGACAAAGAACTGCGCGAAAGCGCTA CCAGCAACGTCGAGGCGGCCAAGAAAGTTGGTCTGCTGGTCGCCGAGCGTGCCAAGGCCGCTGGCGTTACCCAGGTGGCCTTTGATCGTTCTGGCTTCAA GTACCATGGTCGCGTCAAAGCGCTGGCCGACGCTGCTCGTGAAGGCGGGCTGGAGTTCTAAGTCATGGCAAATAACGATCAAAAGCGCGACGAAGGCTAC ATCGAGAAGCTGGTTCAAGTTAACCGCGTAGCCAAAACCGTGAAAGGCGGCCGTATCTTCGCCTTCACCGCTCTGACCGTGGTTGGCGATGGCAAAGGCC
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| Amino Acid Sequence |
>50S ribosomal protein L6
MSRVAKNPVRLPAGVEVNLAGQALSIKGAKGALELKVHPSVEVIQESGELRFAARNGDQQTRAMAGTTRALVNNMVVGVSQGFERKLQLVGVGYKAQAKG QVLNLALGFSHPVDYDLPQGITAETPNQTEILIKGIDKQLVGQVAAEIRGFRPPEPYKGKGVRYADEVVHRKEAKKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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