Strain | Pseudomonas psychrotolerans L19 contig00006, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGATCAGCCACAACGCTGCCCAGGCCGCGGCCCAGGCCGGCATCCCCTGCTGGGCGCTGCGCCGCCCGGGTTGGCAGGCAGGAGCCGACGATGACTGGC GCGAGGTGGCCGACTGGTCCGAGTTGCAGACCGCACTGGCACCCTTCGTCCGCCCCTTCTTCACCCTGGGGCGCGAACCTCTGGAGCATCTGGAAGAAAT TCCCACCCACCAGTTCTGGACCCTGCGCCTGCTCGACGCCCATCCCGGCCACGCACGGGCGCGGATCATCGCCGACCGCGGCCCCTTCGCCCTGGAGGCC GAACGCGCACTCTTCGCCGCGGGCGACTTCGATGTGCTGATCAGCAAGAACAGCGGCAGCGCCGCCACCCAGCCCAAGTTGCAGGTGGCCCGCGAGCGGG GCCTGCCGGTGCTGATCCTGCGCCGCCCCCCCCTGCCCTGCGTCGATCGCGAATTCGCCAGCGCCGCCGAACTGCTTGTCGCCCTGGCCGAGGAAACCCC
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DNA Sequence for Gene |
>PPL19_13815
ATGACCGTTCATTTCATCGGCGCCGGTCCCGGCGATCCCGACCTCATCACCGTCAAGGGCCAGCGGCTGATCCGCCAGTGCCCGGTGATCCTCTATGCCG GCTCCCTGGTGCCGCCCGCGGTGCTGGAGGGGCATCAGGCCGAGACGGTGATCGACACCGCCCACTTGGATCTCGACGCCATCGTCGGCCATCTGGCCGC CGCCCATGCCCGCGGCCAGGACGTGGCCCGGGTGCATTCCGGCGATCCCTCGCTGTACGGCGCCATCGGCGAGCAGATCCGTCGCCTGATGGCGCTGGGC ATTCCCTATGAGATCGTTCCCGGCGTCACCGCTACCGCTGCCTGCGCTGCGCTGCTGGGTTGCGAGCTGACCCTGCCCGGGGTCAGCCAGACGGTGATCC TCACCCGCTACGCCAGCCGCACGGCCATGCCGGCAGGCGAGGCGCTGGCCGACCTGGCCCGCCATCGCGCGACCCTGGCGATCCACCTCGGCGTAGGCCA GCTGGAGCGCATCGTCGCCGACCTCTTGCCGCACTACGGCCCCGCCTGCCCGGTGGCGATCGTCCACCGCGCCAGCTGGCCGGACCAGGCCAGCGTCCGG GGCACCCTGGCCGACATCGTCGAACGAGCGCGGGACAAGGACTTTCGCCGCACCGCCCTGATCCTGGTCGGCGAGGTGCTGGCGCCGGGGGATTTCCAGG ATTCCAAGCTGTATCGGCAAGGACCGGGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCGTAGATTGGGCTGAGGCGGCTCCACCGCCGAAAGCCCAACCCAACCTACGTCACCCCTGCATCAATACTCCGCCCCACCCTCGCTACCGCTGACGAT GGCCACGCCCGAGCTGGTTCCCAGGCGGGTCGCACCGGCGTCCAGCATGGCCTGGGCGGTGGCGCGGTCACGCACGCCGCCGGAGGCTTTCACGCCCATT TCCGGACCCACCTCTTCGCGCATCAGGCGGACATCGTCCAGGGTCGCGCCGCCGTGGCCGAAACCGGTAGAGGTCTTGACGAAGGCGACGCCGAGGTCGC GACAGATCCGGCAGGCCTGGCGCTTCTGCTCATCGTCGAGCAGACCGGTCTCCAGGATCACCTTGAGCGGTACCGCGCCACAGGCGGCCTGCACCGCGGC GATGTCGGCGGATACCTCTTCCAGCAGGCCATCCTTGAGCCAGCCGAGGTTGAGCACCATGTCGATCTCCCCGGCCCCGGCGGCGATGGCCTGCTCGGCC
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Amino Acid Sequence |
>precorrin-4 C11-methyltransferase
MTVHFIGAGPGDPDLITVKGQRLIRQCPVILYAGSLVPPAVLEGHQAETVIDTAHLDLDAIVGHLAAAHARGQDVARVHSGDPSLYGAIGEQIRRLMALG IPYEIVPGVTATAACAALLGCELTLPGVSQTVILTRYASRTAMPAGEALADLARHRATLAIHLGVGQLERIVADLLPHYGPACPVAIVHRASWPDQASVR GTLADIVERARDKDFRRTALILVGEVLAPGDFQDSKLYRQGPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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