Pseudomonas psychrotolerans L19, PPL19_10627

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas psychrotolerans L19 contig00004, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCATAGCGAACCGGTATATCCCGTGACGCTTTTGTCGCGCCGACCCTGCCGCGTTGTACGTTATTTGACCACTTCGCTCTGATCCCAGCCTTCACGCG GACTGGCTGGGCACCACCCCCAGGATACCCCCCAGTCCCGAACAGCTTATCCACGTCTTATCCACAGCCGGAAACGTGACAAACGCGACATCTAGTGGCC CTTGCACCCCCGCACCACCATATATAGCAGTTCGTCGGCATGGGCTGGGACGGCGAAACACCCCTCTGTCAAGACTGTCTTCCCTAACGAGGAGGGCTTA TCCTGTCGCCCGAATTATGAATTTCCAGGGTCCCTGACCCCGAACGCCGGCTCCTGCGGGAATCGGCGCTGGTACGGCTTTTCGTTGGAATCTTCATTGG TAATGGCGCGACAGGCAGTCGTCGCGCAGGCCCCAGGCCGACACTCTTCCGGATCGCCGGCGCGCCGACGATCCCCTCTTTCCGATCAAGGGAGTTCCGC
DNA Sequence for Gene
>PPL19_10627
ATGCACACCGACCTGACCCGCGAGCAAGCCCAGCAGGGCCGCCCGGCGCAAGATGCCAGCCAGGACCTGGGCGCCACCGCCCCCGGCCAACTGCGCGTCA TCAAGCGCAACGGTACCGTCGTCCCCTACACCGACGACAAGATCACCGTGGCCATCAGCAAGGCTTTCCTCGCCGTGGAAGGCGGTACTGCCGCGGCCTC CTCGCGTATCCACACCACCGTCAAGCAGCTCACCGACCAGGTCAGCAGCACCTTCAAGCGCCGCATGCCGTCGGGTGGCACCATCCACATCGAAGAGATC CAGGACCAGGTCGAACTGGCCCTGATGCGCGCCGGCGAGCAGAAGGTCGCCCGCAGCTACGTGATCTACCGTGAAGCCCGCAGCCAGGAGCGCAAGCAAG GCGCCGCCAGCGACATCGCCGAGCCGCACCCGAGCATCCGCGTCACCAAGGCCGACGGCACCACCCAGCCGCTGGACATGGGCCGCCTGAACACCATCAT CAGCGAAGCCTGCGAAGGCCTCGAAGAGGTGAACGGCGAGCTGATCCAGAAGGAAACCCTGAAGAACCTGTACGACGGCGTGGCCGAGAAGGACGTCAAC ACCGCCCTGGTGATGACTGCCCGCACCCTGGTCGAGCGCGAGCCCAACTACTCCTACGTCACCGCCCGCCTGCTGCTGGACAGCCTGCGCGCCGAAGGCC TGAGCTTCCTCGGCGTGGCCGAGTCCGCCACCCACCACGAGATGGCCGACCTCTACGCCAAGGCCTTGCCCGCCTACGTCGCCAAGGGCGTGGAGCTGGA GCTGCTGGACCCGAAACTGGCCACCTTCGACCTGGCCAAGCTGGGCGCCGCCATCGATCACGAGCGCGACCAGCAATTCACCTACCTGGGTCTGCAGACC CTGTACGACCGCTACTTCCTGCACAGCCACGGCACCCGCTTCGAGCTGCCGCAGCTGTTCTTCATGCGCGTGGCCATGGGTCTGGCGCACATGGAGCAGG ACAAGGAAGCCCGCGCCATCGAGTTCTACAACCTGCTGGCCAGCTTCGACTACATGGCGTCCACCCCGACGCTGTTCAACGCCGGCACCCTGCGTCCGCA GCTGTCCAGCTGCTACCTGACCACCGTGCCCGACGACCTGTCCGGCATCTATGGCGCCATCCACGATAACGCCATGCTGTCGAAGTTCGCCGGCGGCCTG GGCAACGACTGGACCCCGGTGCGCGCGCTGGGCTCCTACATCAAGGGCACCAACGGCAAGAGCCAGGGCGTCGTGCCCTTCCTCAAGGTGGTCAACGACA CCGCCGTGGCGGTCAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAAACCTGGCACCTGGACATCGAGGAATTCCTCGAGCTGCGCAA GAACACCGGTGATGACCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCCGACCTGTTCATGAAGCGCGTCTTCGAGGACGGCAACTGGACC CTGTTCTCCCCCGCCGACGTGCCCGATCTGCACGACCTCTACGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGACCGAGTACGGCAAGC TCAAGCTGCACAAGACCATCAAGGCCAAGGACCTCTGGCGCAAGATGCTGTCCATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGACCCGTG CAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTGCACAGCTCCAACCTCTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCCGTGTGC AACCTGGGTTCGGTGAACCTGGTGAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGGTCGCCCGTACCGTCAAGACCGCCGTGCGCATGCTCGACA ACGTCATCGACATCAACTACTACTCGGTGCCCCAGGCGGAGAACTCCAACCTCAAGCACCGTCCGGTCGGCATGGGCATCATGGGCTTCCAGGATGCGCT GTACCTGCAGCACATCGCCTACGGTTCGGATGCCGCCGTTCAGTTCGCCGACACCTCCATGGAGGTGATCAGCTACTACGCCATCCAGGCCTCCTGTGAC CTGGCCGAAGAGCGTGGCAGCTACTCCAGCTTCCAGGGTTCGCTGTGGTCCCAGGGCATCCTGCCGATCGACTCCGAGAAGCGCCTGATCGAAGAGCGTG GCGCCAAGTACATCGAGGTCGACCTGTCCGAGACCCTGGACTGGGCCCCGCTGCGCGAGCGTGCCAAGAAAGGCATCCGCAACTCCAACATCATGGCCAT CGCGCCGACCGCGACCATCGCCAACATCACCGGCGTGTCCCAGTCGATCGAGCCGACCTACCAGAACCTCTATGTGAAGTCGAACCTCTCGGGCGAATTC ACCGTCATCAACCCCTACCTGGTACGCGACCTCAAGGCCCGCGGCCTGTGGGACTCGGTGATGGTCAACGACCTCAAGTACTACGACGGCTCCGTGCAGC AGATCGAGCGCATCCCGCAGGATCTGAAGGACCTGTACGCCACCGCCTTCGAAGTGGAGACCAAGTGGATCGTCGAGGCCGCCAGCCGTCGCCAGAAGTG GATCGACCAGGCCCAATCGCTGAACCTGTACATCGCCGGCGCCTCGGGCAAGAAGCTCGATGTGACCTACCGCATGGCCTGGTTCCGCGGTCTGAAGACC ACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCCGTGAGCGCCGACCCCATCACCGGCGTCC AGGCCAGTGCCGCGCCCGCTCCGGCCCAGAAAGTCGAAGCCGCTCCGGCCCCCGCTCCGGCTCCGGTGCCCAAGGCCTGCAGCCTCGACGATCCCGAGTG CGAAGCCTGCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTAACCAAGCCCTCTCTTAGCAGAGGGCTGCTCTTATCCCCTCTCCCTCGGGGAGAGGGCTAGGGTGAGGGCCACCCCCACCCCAAAGCTCCAGATCCCC TCTCCCCCCTGGGAGAGGGCTAGGGTGAGGGCCCTGCCGCCCCGCCCCCACCACACAGCCACCCAGGAGACACCCATGCTGAACTGGGAAGAATTCGACA AAGACGACGACACCGCCACCGCCAAGCCCGCGCAGGCCCCCGGCCAGCAGGCGCCCGCCCAAACCGAGCGCCTGGATTCCGAGGGCGACGCCCTGGTCCA TGACGCCCGCGCCCTGTCCGCCGACGACTCCGACGCCGTGGCCCGCGCCAAGGCCGCGCTGAACGAGCTGGATATCCAGGAAGGCCTGGACGACCTGGAA GGCTCCTCCGCTCGCGTGCACGTCGGCGACAAGCAGATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTGCCCTTCAAGTACGACTGGGCCTGGCAGA
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MHTDLTREQAQQGRPAQDASQDLGATAPGQLRVIKRNGTVVPYTDDKITVAISKAFLAVEGGTAAASSRIHTTVKQLTDQVSSTFKRRMPSGGTIHIEEI QDQVELALMRAGEQKVARSYVIYREARSQERKQGAASDIAEPHPSIRVTKADGTTQPLDMGRLNTIISEACEGLEEVNGELIQKETLKNLYDGVAEKDVN TALVMTARTLVEREPNYSYVTARLLLDSLRAEGLSFLGVAESATHHEMADLYAKALPAYVAKGVELELLDPKLATFDLAKLGAAIDHERDQQFTYLGLQT LYDRYFLHSHGTRFELPQLFFMRVAMGLAHMEQDKEARAIEFYNLLASFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAGGL GNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFEDGNWT LFSPADVPDLHDLYGKAFEERYEYYEALTEYGKLKLHKTIKAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVC NLGSVNLVNHIVDGKLDTAKVARTVKTAVRMLDNVIDINYYSVPQAENSNLKHRPVGMGIMGFQDALYLQHIAYGSDAAVQFADTSMEVISYYAIQASCD LAEERGSYSSFQGSLWSQGILPIDSEKRLIEERGAKYIEVDLSETLDWAPLRERAKKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEF TVINPYLVRDLKARGLWDSVMVNDLKYYDGSVQQIERIPQDLKDLYATAFEVETKWIVEAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWFRGLKT TYYLRALAATSTEKSTINTGKLNAVSADPITGVQASAAPAPAQKVEAAPAPAPAPVPKACSLDDPECEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site