Strain | Pseudomonas psychrotolerans L19 contig00003, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGGGTGATCACGACTCTACGCATCTTGCCTGTCCTTTTGCGGGGGGAGGGAGGTCTGGAGCTACGCTCAGCTGGCTTCGATACGGAAGCCGATCTTCAGG GTGACCTGATAATGGGCCACCTTGGCGTCCTGGATATGACCGCGGATTTCACCCACCTCGAACCATTCCAGGTTCTTGACCGACTTGGCGGTCTCGGCGA GGGCGTTGTTGATGGCGTCCTCGACACTGGTGGTGGAGGAGCCAACGATTTCCAGCTTCTTGTAGGTGTGATGATCGGACATGAAACTCTCCTGGGTCAG CAATAGCGGGCGCTGCAGCGGATAGCCGGCAACGCGTTGACCGGTGTCGCGGTCGACTCGCCGGGAAGGGTGCCTCTGCCATTTGAGGCCGCGAAAGGCC CCGATAAGTTCACTGCCCAGGCTCTCGCCCACGGCTTTGCAGCACTTTCCAACGGCTCGGTAGTCACATTTCCTGAATCCGTCCATCCCAGGAGGTTGTC
|
|
DNA Sequence for Gene |
>PPL19_09026
ATGGCCCGTAACACCGATTACCAGGCGTCCATCGCCAGCATCGAGAACGAAATCAACAGCCTGCTCGACTCGCTGGCGTCGCTGAAGAAGAACGCTGCAC GCGAATCCCGCAGCAGTCTGAACTCCTTCAAGAGCACCGCTCGCGAAGCCCTGCACCATTCGGGCGATTCGCTGGAAGAAGTCTATGACGACGTGCGTCG CCTGACCCGTCAGTACGGTCGCGCCGCCAGCGGCGTGGCGCGCGAACATCCCTGGGCCACCGTCGGCATCGCCGCCGGCGTGACCGTCCTGGTCGGCTGG GCGCTGCTGCGCGGCGACCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCGTGGCGGTTCGAGGCATCCTCAAGGGGTGCCTCGGGCGCTAGCGCTCGGCTAGCTCGGTTCTGAGCCAGGCCGCCAACCGCTCCACCCGTTCATCCGC CAGCCGACCCGGCGCCCACAGCGCCAATTCTGCACCGGTCGCCGCAAAACCCCAGGGCGCCACCAGCCGGCCCGCCTTGAGATCCGCCGCCACCAGTGGC TCCGGCGCGATCGCCACGCCCAATCCCGATAGCGCCGCTTCCAGCAGGTAATAGAGGTGCTCGAAGCCCTGCCCGTACTCCAGCACCGGTGCCTCCTGGC CCTGGGTGGCGAACCACTGTGGCCAGGCCTGGGGCCGTGACAGGGTGTGCAGCAACCGTTCCGCCAGCAAGGCCTGCAGGTCGCCGTCCCGCAATCTCAG ATAGGCCGGGCAATAGGGGCTCAGCACCGGGCCGATGCGCTCGGCTGCCAGGTGATAAGGCATCACTTCCTGCGGTGGCGCCGTCTCGGTGAACAGCAGG
|
|
Amino Acid Sequence |
>hypothetical protein
MARNTDYQASIASIENEINSLLDSLASLKKNAARESRSSLNSFKSTAREALHHSGDSLEEVYDDVRRLTRQYGRAASGVAREHPWATVGIAAGVTVLVGW ALLRGDH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|