Pseudomonas psychrotolerans L19, PPL19_08881 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas psychrotolerans L19 contig00003, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGAGTGCTACCCGGTGACCGGAGAGATCACCTATGGCCTGGAGCGCCTGGCCATGTACCTGCAGGGCGTGGATTCGGTCTATGACCTGATCTGGGCCG ACGGCCCCTTCGGCACCGTGACCTACGGCGACGTCTTCCACCAGAACGAGGTGGAGCAGAGCACCTACAACTTCGAGCACGCCAATGTGCCCAAGCTGTT CGAGCTGTTCGACTTCTATGAGTCCGAGGCCAATCGCCTGATCGCCCTGGACCTGCCGCTGCCCACCTACGAGATGGTGCTCAAGGCCTCCCACACCTTC AACCTGCTGGACGCCCGCCGCGCCATCTCGGTGACCGAGCGCCAGCGCTACATCCTGCGCGTGCGCACCCTGGCGCGCAGCGTCGCCCAGGGCTATTTTA AGGCCCGGGCGCGGCTGGGCTTCCCGCTGGCCAGCCCCGCGCTGCGTGACGAGGTCCTGGGTCGCGACGATGTCCAGGCGCTGCTCAAGGAGGGCGAATG
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| DNA Sequence for Gene |
>PPL19_08881
|glyS
ATGAGCACCACTCTGGATTTCCTGGTCGAACTGGGTACCGAAGAACTGCCACCCAAGGCGCTCAAGACCCTTGGCGACAGCTTTCTCGCCGGCATCGAAA AGGGCCTCAAGCAGGCCGGTCTCGGCTATGCCAGCGCCCGCGCCTATGCCGCGCCACGCCGCCTGGCGGTGCTGGTCGAGGCCCTGCAGACCCAGCAGCC CGAGCGTAGCGTCAATCTGGACGGCCCGCCGATCCAGGCCGCCTTCGGCGCCGATGGCCAGCCGACCCAGGCCGCGCTGGGCTTCGCCCGCAAGTGTGGC GTCGATATCAGCGCCATCGACCGCAGCGGTCCCAAGCTGAGATTCTCCCAGAGCATTCCCGGTCAACCGGCGGCCAGCCTGCTGCCCGGCATCGTCGAAG CCTCCCTGGCCGAGCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGCCGCGAGGAATTCGTGCGCCCGACCCAGTGGCTGGTGATGCTGCTGGGTGA CGAGGTCATCGACTGCGAGATCCTGACCCGCCGCGCCGGCCGTGAGTCCCGTGGCCATCGCTTCCACCATCCCGACGCCGTGCGCATCAGCGCCCCGGCC CACTACGCCGCCGACCTGCGCGCCGCCCATGTGCTGGCCGACTTCGCCGAGCGCCGCCAGCTGATCGAATCCCGCGTGGCCGAACTGGCCGCGGCGGAGC AGGGCAGCGCCGTGGTGCCGCCCGCGCTGCTGGACGAGGTGACCGCCCTGGTGGAATGGCCGGTGCCCCTGGTCTGCGCCTTCGAGGAACGCTTCCTCGA GGTGCCCCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGCCCAGGGCAAACTCCTGCCGCGCTTCATCACCGTG GCCAACCTGGAGAGCAAGGATCCGGCGCAGATCGTCAGCGGCAACGAGAAGGTGGTCCGCCCCCGTCTCACCGATGCCGAATTCTTCTTCAAGCAGGACC AGAAGCAGCCGCTGGAAAGCTTCAACGAGCGCCTCAAGAACGTGGTCTTCCAGGCCCAGCTCGGCACCGTCTACGACAAGGCCCAGCGCGTCGCCGCCCT GGCCGCCTTTATCGCCGAACGCATCGGTGGTGATGCCGAGCGCGCCCACCGCGCCGGTGTGCTCGCCAAATGCGACCTGGCCACCGAGATGGTCGGCGAA TTCCCCGAGATGCAGGGCATCGCCGGCTACTACTACGCCAAGAAGGGCGGCGAGGCCGACGACGTGGCCCTGGCGCTCAACGAGCAGTACATGCCGCGCG GCGCCGGCGCCGAATTGCCGCAGACCCTGACCGGTGCCGCCGTGGCCCTGGCCGACAAGCTCGACACCCTGGTCGGCATCTTTGGCATCGGCATGCTGCC CACCGGCAGCAAGGACCCCTTCGCCCTGCGCCGTCAGGCCCTGGGGGTGCTGCGCATCCTCATCGAGAAGGGCCTGGAGCTGGATCTGCCGGCCGCCGTC GCCTTCGCCATCGCCGGTTACGGCGAGCGGGTCAAGGCCGCGGGGCTGCAGGAGCAGGTGCTGGACTTCGTCTTCGACCGGCTGCGTGCCCGCTACGAGG ACGAAGGCGTCGACACCGCCGCCTACCTGGCCGTGCGGGCCCTGCGCCCGGCTTCGGCGCTGGACTTCGATCAGCGCGTCCAGGCCGTGCAGGCCTTCCG CCGCCTGCCCGAGGCCGAAGCCCTGGCCGCCGCCAACAAGCGCGTCTCCAACCTGCTCGGCAAGTTCGAGGGCACGGTCGCCACCCAGGCCGATGCCACG CTGTTCGAGACCGACGCCGAGCGCACCCTGGCCGCGGCCATCGCCGATGCCGAGCGGGAAGCCGCGCCCCTGGCCGAAGCCCGCCGTTATCGCGAAGCCC TGGAGCGCCTGGCCAGCCTGCGCGCCCCGGTGGATGCCTTCTTCGACGAGGTGCTGGTCAACGCCGAGGACGAGCGCGTCCGCGCCAACCGCTATGCGCT GCTCGCCCACCTGCGTGGCCTGTTCCTGGGCATCGCCGACATCTCGGTGCTGGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCATGAAGCTGATCGTGCTGGACCGCGATGGCGTCATCAATGTCGATTCCGATGACTACGTGCGCAGCGCCGAGCAGTGGCAACCGCTGCCCGGCAGCC TCGCCGCCATCGCTCGCCTGAACCGGGCCGGCTGGCAGGTGGCCGTGGCCACCAACCAGTCCGGCCTGGCCCGCGGCTACTTCACGGCAGACGACCTGAC GGCCATGCACGAAAAATTGCAGCGGCTGCTGGCGGAGGAGGGCGGTCGGGTCGACCTGATCCTGCACTGCCCCCATGGCCCGGAAGCGGGCTGCGACTGC CGCAAGCCGCTGCCCGGCCTGTTTCGCGCCATCGCCCACCACTATGGCCGGGCCGACCTGAACGGCGTGCCAGTGGTGGGCGACAGCCTGCGCGATCTGG AAGCCGGCGTGGCCCTTGGCTGCACGCCCTGTCTGGTGCGTACCGGCAAGGGCGAGCGCACCCTGGCCAAGCCCTTGCCAGCCGGTACCCGGGTCTTCGC
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSTTLDFLVELGTEELPPKALKTLGDSFLAGIEKGLKQAGLGYASARAYAAPRRLAVLVEALQTQQPERSVNLDGPPIQAAFGADGQPTQAALGFARKCG VDISAIDRSGPKLRFSQSIPGQPAASLLPGIVEASLAELPIPKRMRWAARREEFVRPTQWLVMLLGDEVIDCEILTRRAGRESRGHRFHHPDAVRISAPA HYAADLRAAHVLADFAERRQLIESRVAELAAAEQGSAVVPPALLDEVTALVEWPVPLVCAFEERFLEVPQEALITTMQDNQKYFCLLDAQGKLLPRFITV ANLESKDPAQIVSGNEKVVRPRLTDAEFFFKQDQKQPLESFNERLKNVVFQAQLGTVYDKAQRVAALAAFIAERIGGDAERAHRAGVLAKCDLATEMVGE FPEMQGIAGYYYAKKGGEADDVALALNEQYMPRGAGAELPQTLTGAAVALADKLDTLVGIFGIGMLPTGSKDPFALRRQALGVLRILIEKGLELDLPAAV AFAIAGYGERVKAAGLQEQVLDFVFDRLRARYEDEGVDTAAYLAVRALRPASALDFDQRVQAVQAFRRLPEAEALAAANKRVSNLLGKFEGTVATQADAT LFETDAERTLAAAIADAEREAAPLAEARRYREALERLASLRAPVDAFFDEVLVNAEDERVRANRYALLAHLRGLFLGIADISVLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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