Pseudomonas psychrotolerans L19, PPL19_08341

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas psychrotolerans L19 contig00003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCTATGCCCAGCTGTGTCCCAACGTGGCCCGCCTGCTGGGCAACCTGGTGTTTTCCCTGGACATGGAAAATCAGCTGATGGACCAGGTGCTCAACGAAA AGGACAACCCGCGCCGCGCCGTGCGCAACTGGCTCAAGCGCAATCCCGAACACCTGGATGTCTGGCTCAAGGGTGTCACCACCCGCAGCGGTGCGCCGGG CAACGCCTCGGTGAAAGCCACTCTGGCCAACTGAACACGGGGGCCCAAGGGCTTGCCAGCACCTCTGGCCCGCGTCTTGCCCCAGGGGTCCGTATGATGG CTACAAGCCAACTTCGGCAACCGCGCCCGGCCGCCAGGGTGCCTGAGCCTCATGCTGGATGCGACATTTCCGCTTCTGGTTACGACGCCGCGTACACTGG TAGCGACGCAGGCGGTAGGCGAGCCTGGGGGGATGGGTTACAGATAAATACACGTGGGGCGCACCGAAAGGTACCCCGCCAAACGCAAGGAGATGTGTCC
DNA Sequence for Gene
>PPL19_08341
ATGAAAGGTTGTTCCCGTTGGCTCTTGAGTGCCGCCCTGCTGGCGCCACTCGCTGTTCAGGCAGCCGAACCGGCTTCCTGTGCCAAGGTGCGCTTTGCTG ACGTCGGCTGGACCGACATCACCGTGACCACGGCCGTGACCAGCGAGGTGCTGCATGCCCTCGGCTACCAGACCACGACCAACATGATCTCCGTACCGGT TACCTATAAGTCCTTGCAGAACAAGGATATCGACGTCTTCCTCGGCAACTGGATGCCGAGCATGGCGGCGGACATCAAGCCCTACGCCGATAATGGCAGC GTCGAGACCGTGCGCGCCAACCTGGAAGGCGCCAAGTACACCCTGGCCGTCCCCCAGTACGTCTATGACGCCGGGGTGAAGAGCTTCGCCGACATCGCCA AGAACGCCGACAAGTTCGATGGCAAGATCTACGGCATCGAGCCGGGCAACGACGGCAATCGCCTGATCCAGGGCATGATCGACAAGAACGCCTTCGACCT GGGCAAATTCAAGCTGGTGGAATCCAGCGAAGCGGGGATGCTGTCGCAGATCCAGCGCGCCGAGCGTCGCAAGCAGTGGGTGGTATTCCTCGGCTGGGAA CCCCATCCGATGAATACCCGCTTCAAGATGGCCTATCTCGAAGGCGGCGACGACGTCTTCGGTCCCAACTACGGCGGGGCCACCATCTATACCAACGTAC GCAAGGGCTACGTCCAGGAATGCCCCAACGTGGGCAAGCTGCTGACCAACCTGTCCTTTACCCTGGACATGGAAAACCAGCTGATGGACAAGGTCCTCAA CGAAAAACAAGCCGCGAACGCCGCCGCCAAGGCTTGGCTCAAGGCCCATCCGCAGGTGCTGGACCAGTGGCTGGCCGGCGTGACCACTCGCGATGGCAAG CCTGCATTGGAAGCGGCCAAGGCCACCCTGGCCCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGAACAATAACATTCGACTGTCCCGCGCCAGTTCGGGCGGGTACTGCCACAGCCGAAGCACGAATCAGCAGTTCTCGTGCTTCGACCTGTCCACTCCTA CCTGACGGGCACCGTTATGTTAATCACCGACCACAAGCTTCCTCTCGGCCAGCAGATCGCCGACTTCATCGACTGGCTGACGCTGCATGGCGCCAGCGTC TTCGACAAGATCTCCGATGTGCTGTCCGGCCTCATCCACGGCCTCACCGCCGGCCTGATGTGGTTCAACCCGCTGGCCTTCATTGCCCTGGTCGCGGTAG GGGTCTATCTGCTGCAACGCAGCATCGGCCTGGTGATCTTCGCCCTCGTCTCCCTGCTGCTGATCCTCAACCTGGGGTACTGGCAGGAAACCATGGAAAC CCTGGCCCAGGTGGTCTTCGCCACCCTGGTGTGCATCGCCGTCGGCGTGCCGCTGGGCATCATCGCCGCGCACAAGCCCTGGTTCTACACCGGCCTGCGC
Amino Acid Sequence
>glycine/betaine ABC transporter substrate-binding protein
MKGCSRWLLSAALLAPLAVQAAEPASCAKVRFADVGWTDITVTTAVTSEVLHALGYQTTTNMISVPVTYKSLQNKDIDVFLGNWMPSMAADIKPYADNGS VETVRANLEGAKYTLAVPQYVYDAGVKSFADIAKNADKFDGKIYGIEPGNDGNRLIQGMIDKNAFDLGKFKLVESSEAGMLSQIQRAERRKQWVVFLGWE PHPMNTRFKMAYLEGGDDVFGPNYGGATIYTNVRKGYVQECPNVGKLLTNLSFTLDMENQLMDKVLNEKQAANAAAKAWLKAHPQVLDQWLAGVTTRDGK PALEAAKATLAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site