Pseudomonas psychrotolerans L19, PPL19_05865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas psychrotolerans L19 contig00002, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCGGCTTCATGCTCATCGACACCCTGCTCTCCGACGAGCCCGGCGCCTTCGTCGATGCCCTCAAGCACCTGATCCTGCCGGCCATCGTGGTGGGCACC ATTCCCCTGGCGGTGATCGCGCGCATGACCCGCTCGGCCATGCTCGAAGTGCTGCGCGAGGACTATGTGCGCACCGCTCGCGCCAAAGGCCTGTCGCCCA AGCGGGTAGTCTTCGTCCACGCCCTGCGCAACGCCCTGATCCCGGTGCTGACCGTGCTCGGCCTGCAGGTCGGTAGCCTACTCTCCGGCGCGGTGCTCAC CGAGACCATCTTTTCCTGGCCCGGCATCGGCAAGTGGCTGATCGAGGCCATCGGCGCCCGGGACTACCCGGTGGTGCAGAACGGCATCCTGCTGATCGCC ACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGTCAATCCGCGCATCCGCCACCAGCGTTGATGCGCCCATACGGACAGAGCCT
DNA Sequence for Gene
>PPL19_05865
ATGACAACGGTAAACACCCCGGCCGCTCAAGACCCGAGCGCCCTCTACCCCTCCCCCTTCAAGGAGTTCTGGTACGCCTTCGCCCGCAACAAGGGCGCCC TCGGCGGGCTGATCTTCATGGTCATCGTGGTGTTCTGCGCGCTCTTCGCGCCCTGGGTCGCACCCCATGCGCCCAGCGAGCAATTCCGCGACTTCATGCT CACCCCGCCACTGTGGCTGGATGGCGGCAACAGCCAGTTCCCGCTGGGCACCGACGAGCTGGGGCGTGACCTGCTCAGCCGACTGATCCACGGCGCCCGG CTGTCGCTGCTGATCGGCCTGGCCTCGGTGGTCTTCTCGCTGATCCCCGGCATCCTGCTCGGCCTGATCGCCGGCTTCTCGCCCAACCGCGCCGGTCCGG TGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCCTCGCTGCTGCTGGCCGTGGCCATCGTCGCCATCCTCGGCCCAGGCCTGATCAACACCGTGGT GGCCATCGCCATCGTCTCGCTGCCGTCCTATGTGCGCCTGACCCGCGCCGCGGTGATGGGCGAACTGCATCGCGACTACGTCACCGCCTCGCGGCTGGCC GGTGCCGGCACCCTGCGGCTGATGTTCGTCAGCGTGCTGCCCAACTGCATGGCGCCGCTGATCGTCCAGGCCACCCTGAGCTTTTCCTCGGCGATCCTCG ATGCCGCCGCCCTGGGCTTCCTCGGCCTCGGCGTGCAGCCGCCCACTCCCGAGTGGGGCACCATGCTGGCCTCGGCCCGTGACTACATCGAGCGCGCCTG GTGGGTGGTGACCCTGCCGGGTCTCGCCATCCTCTTCACCGTGCTGGCCATCAACCTGATGGGCGACGGCCTGCGCGATGCCCTCGATCCGCGTCTGAAG GTGCAGTCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTCCTCGAAATCCAGAACCTCTCGGTGCGCTTCGGCGGCGCCGACGCCCCGCCGGTGGTGGAAGGCCTCGATCTCACGGTGGATCAGGGTGAGATCGT CGCCATCGTCGGCGAATCCGGCTCCGGCAAGTCGGTGACCATGATGGCCGTGATGGGCCTGATCGATCACCCCGGCCGCATCACCGCCGACCGCCTGGCC TTCGACGGCCAAGACCTGCTCAGCCTCAAGGGTCGCCGCCGGCGCCACCTGATCGGCAAGGAGCTGTCGATGGTCTTCCAGGACCCTATGACGGCGCTCA ACCCCAGCTACACCGTGGGCTTCCAGTTGGAAGAGGTGATCCGCCAGCATCTGGGCCTCAAGGGTCGCGCCGCTCGCCAGCGCGCTCTGGAATTGCTGGA AAAGGTCGAGATCCCGGCCGCGGCCAGTCGTCTCGGCGCCTATCCGCACCAGCTGTCCGGGGGCATGAGCCAGCGCGTCGCCATCGCCATGGCCATCGCC
Amino Acid Sequence
>peptide ABC transporter
MTTVNTPAAQDPSALYPSPFKEFWYAFARNKGALGGLIFMVIVVFCALFAPWVAPHAPSEQFRDFMLTPPLWLDGGNSQFPLGTDELGRDLLSRLIHGAR LSLLIGLASVVFSLIPGILLGLIAGFSPNRAGPVIMRLMDIMLALPSLLLAVAIVAILGPGLINTVVAIAIVSLPSYVRLTRAAVMGELHRDYVTASRLA GAGTLRLMFVSVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVTLPGLAILFTVLAINLMGDGLRDALDPRLK VQS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site