Strain | Pseudomonas psychrotolerans L19 contig00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGATGCGCATCCAGAGCGAATTGCGCAACACCGTGATGATGATCACCCACGACGTGGACGAGGCGGTGCTGCTCTCGGATAGCATCGTCATGATGACC AACGGCCCGGCAGCCACCATCGGCGAGATCCTAACCATCGACCTGCCGCGGCCACGCGATCGCATCACCCTGGTCGACGATCCCCGCTACAACGGCTATC GCCACGCGGTGCTGAGCTTCCTCTACGAGAAGCACAGCCACCCTGGTGCCGTAGCCTGACGATTCGCACCGTTTCAAGGCAACACGCCTCGAAACGGGGC GATTTTGCGGTCTCCCGGGCGCACAAACCCAGGGTTTGTCTCGCTGGGGCAACTGGCACGAAGCCTGCAAATCCTCAGACAACATAGGTCTTTCTTCAAC GGCGAGGAAAGACCCTCCGGACAAAGGCGTCCCAGCTGCTTGCAGCGGGACGCCTTTTTTTTGCGTTACAGTCGCCACCCTGGATACGAGAGGTCACTAC
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DNA Sequence for Gene |
>PPL19_02605
ATGAGCGGGAAAGTCTGGTTGATCGGTGCCGGCCCCGGCGATCCCGAATTGCTGACCCTCAAGGCCGTGCGCGCCCTGGGCGAGGCCGAGGTGGTGATGA TCGATGACCTGGTCAATCCGGCGGTGCTCGAACACTGCCCGAACGCCCGGGTGATCCGCGTCGGCAAGCGCGGCGGTTGCCGCTCCACGCCCCAGGCCTT CATCCATCGACTGATGCTGCGCTATGCCCGCCAGGGCCGTTGCGTGGCCCGGCTCAAGGGCGGCGATCCCTGCATCTTCGGTCGCGCCGGCGAGGAAGCC GAATGGCTGGCCGCCCGTGGCGTCAGCAGCGAGATCGTCAACGGCATCACCGCCGGCCTGGCTGGCGCCACCGCCTGCGGCATCTCCCTGACCCTGAGAG GCGTGGCCCGGGGCGTGACCCTGGTCACCGCCCACACCCAGGACGACAGCGCGCCCAATTGGCCGGCCCTGGCCGCCACCGGCACCACCCTGGTGGTCTA CATGGGCGTGGCGCGCCTGGCCGAGATCCAGCAGGGCCTGCTGGACGGCGGTCTGGCCCTGACCACCCCGGTGGCCATGATCGAGAACGCCTCCCTGCCC AGCCAGCGCGAGTGCCGCTCGACCCTGCAGGATCTGCAGGTGGACGCCGCCCTCTTCCAGCTGCGCAGCCCGGCGATCCTGGTGATCGGCGAGGTGGTCG GCCAGGCCGCCCTGCAACAGGCCCTGAGCTTCGCCGCCCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGAACTCCGGAGCCCAGCCGCCGTTCCTATGGGTAATCCCCCAGCAGAGCGGCGCCCATGGACCTCGTCATCGCTCGCCCGGACGGCCTCTACTGC CCGCCCGGCGACTTCTACATCGATCCCTGGCATCCGGTGGAACGTTCGGTCATCACCCATGGCCACGGTGACCATGCCCGGGTAGGCAACGGTCACTATC TCGCCACCTCGGCCAGTGCCGGCATCCTGCGCGCCCGGCTCGGTGCCGACATCAACCTCCAGACCCTGGAGTACGGCGAGGTCATCGACCACCACGGGGT CAGGCTGAGCTTCCATCCGGCCGGCCATGTGCTGGGGTCGGCCCAGGTGCGTCTGGAATACCGAGGCGAGGTCTGGGTCGCCTCGGGCGACTACAAGGTC GAACCCGATGGCACCTGCACCCCTTTCGAGCCGGTGCGCTGCCATACCTTCATCACCGAATCCACCTTTGGCCTGCCGATCTATCGCTGGCGATCCCAGG
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Amino Acid Sequence |
>uroporphyrin-III C-methyltransferase
MSGKVWLIGAGPGDPELLTLKAVRALGEAEVVMIDDLVNPAVLEHCPNARVIRVGKRGGCRSTPQAFIHRLMLRYARQGRCVARLKGGDPCIFGRAGEEA EWLAARGVSSEIVNGITAGLAGATACGISLTLRGVARGVTLVTAHTQDDSAPNWPALAATGTTLVVYMGVARLAEIQQGLLDGGLALTTPVAMIENASLP SQRECRSTLQDLQVDAALFQLRSPAILVIGEVVGQAALQQALSFAAQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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