Pseudomonas stutzeri B1SMN1, B382_23258 (mtnA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00026, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGGCTGCGAAAAGGATTTCGCTGAGTGCCGAATCCGGCCAGCCGCCAGCGGGCAAGAGCGCATCCAGCATGGCATGTCCGGTCGGTTGGGCCGCCGTA GGAGATGCAACGGCCTGGCCACGCCAGATGCGGCGAGCATCCAGCAGGCGGTCAAGGGCGACCACGGAAGACATGAGTACGGCATCCAGATAACTGTATA TAGATACAGTATTAGGCTGTCATGCACTGGTCAAGCTGACCCGGATAGGCGCGCGCATTCGGCGATCTGGCGTCAGGGCGCGCGCCGCTATTCGATTGGA ACTGACATGACCTAGGTATCAATAGCGTTGCTTGTACTTGGAAAATCAGTGCATTAGCATTCGCGCCCGGGATGCGAGGCCTCACTGTTCCCGGCCATAT CGAGATAGAAAGCCCGGTTCGGTCGCGAGCCGGGCTTTTTCTTTGCTGTGCGGGGCGCATCATGGGTCCTGCTTCGACGAAGCTGAACGAGGGAAATGCC
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| DNA Sequence for Gene |
>B382_23258
|mtnA
ATGCGCGAGCGCCTGCTGGCCGCGGAAAAGGTGAAATCGATCGAGTGGCATGGCGATCGCCTGAGCCTGCTCGATCAGCGCAAGCTGCCGACCGAAGAGG TCTGGCACAGCTGCGATTCTGCCGCTGCGGTCGCTGACGCCATTCGCGACATGGTCGTGCGCGGCGCGCCTGCCATCGGCATCAGTGCGGCCTATGCGCT GGTCCTGGCTGCCCGTACGCGCATGGCGGCCGGTGGTGATTGGCGGCAGGCGCTGGAGGAAGATGTCGCGCTCCTTGCTGCATCGCGTCCCACGGCGGTC AATCTGTTCTGGGCGCTGAATCAGATGCGCGAACGTCTCGAACGCCTCAAGCCAGGCGAGGATCCTTGCGCGGCGCTGGAGACCCAGGCCATCTCGATAC ATGAGAGCGATCGGGAGGCCAATCTGGCCATGGCGCAGTTCGGTGTCGACCTCATTCGTCGCCATCAGGGCAATCCGCAGAACCTGCTTACTCACTGCAA CACCGGTGCCCTGGCGACCGGCGGTTTTGGCACCGCGCTCGGTGTCATCCGCGCGGCGCATCTCGATGGGCTGGTGGAGCGCGTCTACGTGGACGAAACC CGCCCCTGGCTGCAGGGTTCTCGCCTGACCGCCTGGGAGCTGCTGGGCGATGGCGTGCCGGCCACGTTGAACGTCGATTCGGCGGCCGCCCATCTGATGA AGTCGCGCGGTATTTCCTGGGTGATCGTCGGGGCGGATCGCATCACTGCCAACGGCGATGTGGCGAACAAGATCGGCACCTACCAGCTTGCGGTGCTGGC GATGCACCACGGCGTGCGTTTCATGGTGGTGGCGCCCAGTTCGACCATCGACATGGCTCTGGAAAGCGGTGACGAGATCCTTCTCGAGGAGCGTGCCGGC AGCGAGCTGCTGGAGGTCAATGGCCAGCGTTTTGCCGCCGAGATCGAAGTTTTCAATCCTGTGTTCGACGTGACGCCGGCCGATCTCATCGATGCCATTG TCACCGAGAAGGGAGTGGTCGAGCGCCCGAACGCCGCGAAGATGACCGAATTGATGAACCGCAAGCGGTTGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATCGCTGCCGACCTTGCGCGCCATCTCGATGGCTGCGCATGTCCTTCGCCTCGGCAAGCTCTGCGAGGCTCCTGCCTGAGGGGCTTCAGGTTATTCCGC AAGGCTCGCTGGCTCGGTTTTGCTGTGCGCAAGGCTCAGCTTATGGCCGCCGTCTGTGTTACCATCCCGCGCTTATCGCAGGACCCTGCTGACTATAAGG AACCAGGCTTCCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTCAAGCAGTCCTACCTTGATTACGCCATGAGCGTGATCA TCGGCCGTGCGCTGCCGGACGCGCGCGATGGCCTGAAACCGGTGCACCGTCGCGTGCTCTACGCCATGAGCGAGCTGGGCAACGACTGGAACAAGCCGTA CAAGAAATCCGCCCGTGTGGTCGGTGACGTGATCGGTAAGTACCACCCGCACGGCGACTCCGCGGTGTACGACACCATCGTGCGTATGGCGCAGCCGTTC
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| Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAEKVKSIEWHGDRLSLLDQRKLPTEEVWHSCDSAAAVADAIRDMVVRGAPAIGISAAYALVLAARTRMAAGGDWRQALEEDVALLAASRPTAV NLFWALNQMRERLERLKPGEDPCAALETQAISIHESDREANLAMAQFGVDLIRRHQGNPQNLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET RPWLQGSRLTAWELLGDGVPATLNVDSAAAHLMKSRGISWVIVGADRITANGDVANKIGTYQLAVLAMHHGVRFMVVAPSSTIDMALESGDEILLEERAG SELLEVNGQRFAAEIEVFNPVFDVTPADLIDAIVTEKGVVERPNAAKMTELMNRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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