Pseudomonas stutzeri B1SMN1, B382_20180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri B1SMN1 contig00017, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGGCTGTAGTCAACGTGCGGCCG ACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAAGACGACGACATGGCCGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCT GTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCG CTGATTGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCACGGCATGACCT ACGCGGCTATCGCCACCGAACTGGGCGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTGATGCTGGTAGCGGAGGACTG
DNA Sequence for Gene
>B382_20180
ATGGGCAGCGACTACCGCGTGTTGCAGCAGGCTGCCGAATGGTTCGCCCTGCTGCAGTCCGGCTCGGTCAGCGCCAGCGAGCGCCGCGCGTGGGCGGCAT GGCTGGAGCAGCCGGAACACGCCCAGGCGTGGGCGAAGGTCGAGCGCATCAGCGGCCAGTTTCAGCCGCTGACCAGCGACGCCATCGGCCGAGCCGCCGG GGCCATGCTGCAGCAACGGCAGTCGACCCGGCGGCAGGCGTTGAAGGTGCTCTCGGTGCTCTGCGGTGGCGCAGTCCTGACCGTCGCCGGCGGTGCGCTG CCCTGGCAGCGTTGGGCGGCCGATGAGCGCACCGCCGTCGGTGAGGTCCGTGATCTGCGCTTGGCCGATGGCACCCGGCTTTGGCTGAACACCGACTCGG CGCTGGATATCCGCTCCGACGCGAAGGAGCGGAGGCTGGCGCTGCAGCATGGCGAACTGCTGATCGACGCGCCCGCCAGCCGGCGCGGACGACCGTTGGT GTTGAGCAGTCGCGAGGGGCATGTGCGCAGCGAGCAAGCCGCGCGCTTTTCGCTGCGCCAGGAAGAAGGGCGCACGCGTCTCAGCGTGTTCGCTGGCGTC GTGGACATTCAACTAGAGGGTTTCGGCGTGACCAGCGTGCCTGCCGGCCAGCAGGCTGCGTTCGACCGTCGCCATGTCGGGCCGCTGGCTGCTGCGCGCG CCGAGCACCAGGCTTGGGCGACCGGGGTGCTGCTGGCCGACAACCAGCGTCTCGAGGACTTCCTCGCCGAACTGTCGCGCTATCGCCACGGCTACCTCGG TTGCGATCCACGGATCGCCGATCTGCGTGTGGTCGGGGCGTTCCCGCTGGCCGATACCGACCGTGTACTGCAAGCCCTTGCCGCTACGTTGCCTGTGCGC ATCGAGCGGCGCATGGCCTGGTGGGTCAGCCTGGAACCGTTGCCCAAGCAGGCAGGTGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCAACGCTTACGCGAATAAAAAATATTCGCATCTGCAGTTCCCTTTCCGGATTCTCGCCGGGCATAGGACGAAACCGTCATTCGAACAGGACTTCCCAT GCGCTCGACCGCCTTGCCCTTCCTTCCCGACCGTTCCCGTGCCCTGGCGCTGGGTATCCGCGCCGCGCTGCTGTGCCTGCCCCTGAGCATCGCTCCCGGC CTGGCCAACGCCCAGTCGACGACCCAGCAGGCGGTGCGCAGCTACGACATCCCCGCTGGCCCGCTGTCCAGCGCACTGAGCCGCTTCGCCGGCGAGGCCG GGGTGCTGCTATCGGTGGACGGCAGCTTGCTGCAAGGCCTGGAAACGAACGGGCTGCGCGGCCAGTACGGCGTCGACGACGGGTTTGCCGCACTGCTGCA GGGCAGCGGCCTGCAAGCCGTGCGCGACGGCCAGGGCAACTATTCGCTGACTCGCCGCAGCGCGCAGAGCGATGCCGTCGAGCTGCAACCGATGACCGTC
Amino Acid Sequence
>transmembrane sensor
MGSDYRVLQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQAWAKVERISGQFQPLTSDAIGRAAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGAL PWQRWAADERTAVGEVRDLRLADGTRLWLNTDSALDIRSDAKERRLALQHGELLIDAPASRRGRPLVLSSREGHVRSEQAARFSLRQEEGRTRLSVFAGV VDIQLEGFGVTSVPAGQQAAFDRRHVGPLAAARAEHQAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLQALAATLPVR IERRMAWWVSLEPLPKQAGV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site