Pseudomonas stutzeri B1SMN1, B382_19975
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00017, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCAAGGTGGACCTGCCCCATGATGCGGCCTTCTTCATCGCCCAGCGTATTCGCTCCAATGTCCGCGAACTCGAGGGGGCGCTGAAGCGCGTGATCGCTCA TGCCCACTTCATGGGCCGCGACATCACCATCGAGCTGATCCGTGAGTCGCTGAAAGACCTGCTGGCGTTGCAGGATAAACTGGTCAGCGTCGACAATATT CAGCGCACCGTGGCCGAGTACTACAAGATCAAGATTTCCGATCTGCTGTCCAAGCGGCGTTCCCGTTCGGTCGCGCGTCCTCGGCAAGTGGCCATGGCCC TCTCCAAGGAATTGACCAACCACAGCCTGCCGGAGATCGGCGACGCGTTCGGCGGTCGGGATCACACCACGGTGCTGCACGCCTGCCGTAAGATCGCCGA ATTGCGGGAAACGGATGCGGATATACGCGAAGACTACAAGAATTTGCTGCGAACTTTGACAACCTGAGTGCGACCCAATCTATAGGCAAGGGACCAGACC
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| DNA Sequence for Gene |
>B382_19975
ATGCATTTTTCCATTCAGCGCGAAGCCCTGTTGAAACCCCTGCAGCTGGTTGCTGGCGTCGTCGAGCGCCGTCAGACCTTGCCGGTGCTGTCCAACGTTC TTCTCGTCGTACAGGGGCAGCAGCTGTCGCTGACCGGTACCGACCTGGAAGTCGAACTGGTGGGCCGTGTCGCGCTGGAAGATGCCGCCGAGCCTGGCGA GATCACCGTGCCGGCGCGCAAGCTCATGGACATCTGCAAGAGCCTGCCGAGCGATGCGCTGATCAGCATTCGCCTGGATGACCAGAAGGTCGTCATCAAG TCGGGGCGCAGCCGCTTCACGCTGTCGACCCTGCCGGCCAACGATTTCCCTACCGTGGAAGAAGGTCCGGGCTCGCTGTCATTCACCGTCGCGCAGGGCA AGCTGCGCAAGCTCATCGAGCGCAGCGCATTCGCCATGGCCCAGCAGGACGTGCGCTATTACCTCAACGGCATGTTGATCGAAGTGTCCAGCGGCATGTT GCGTGCCGTCGCCACCGATGGCCATCGCCTGGCCATGTGTTCGATGCAGGCCGGCATCGAACAGCCCGATCGCCACCAGGTGATCGTTCCGCGCAAGGGT ATTCTGGAACTGGCGCGCCTGCTCAACGACCAGGATGCCGAGGTCAGCATCGTGCTGGGTCAGCATCACATTCGCGCCACCACCGGCGAGTTCACCTTCA CCTCCAAGTTGGTGGATGGCAAGTTCCCCGACTACGAGCGCGTGCTGCCGCGGGGCGGTGACAAGCTGGTGGTTGGTGATCGCCAGCTGCTGCGCGAGGC GTTCAGTCGCACCGCGATCCTCTCCAACGAAAAGTACCGCGGCATTCGGCTGCAGCTGGAAAGCGGCCTGTTGAAGATCCAGGCCAACAACCCGGAGCAG GAGGAAGCCGAGGAAGAAGTCGCCGTCGACTACAATGGCGGTTCGCTGGAGATCGGTTTCAACGTCAGCTACTTGCTGGATGTCCTTGGCGTGATGACTA CCGAGCAGGTGCGGCTGATTCTCTCCGACGCCAACAGCAGCGCGCTGGTGCAGGAGTTCGATAACGACGATTCCGCCTACGTCGTGATGCCGATGCGTCT GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCGCTTAATGTCCCTCAGCCGTCTCTCCGTCACCGGGGTTCGCAATCTGCACCCGGTGACGCTGACCCCCTCCCCGCGTATCAACATCCTCTTCGGCG ACAACGGCAGCGGCAAGACGAGCCTGCTGGAAGCCATCCATCTGCTCGGCCTCGCACGTTCCTTTCGCAGTATTCGACTGAATCCGGTGATCACCTACGA GCAACCGGCTTGCACGGTGTTCGGCCAGGTCGAGCTTCCGGATCAGCACAGTCGAGCCCTGGGCGTCTCCAGAGATCGCAGTGGCGAAGTCCGAATTCGT ATCGATGGGCAGAGCGTTCGCTCTGCCGCCGAGTTGGCTGACACCCTGCCGCTGCAGCTGATCAACCCTGACAGTTTCCGCTTGCTGGAGGGCGCTCCCA AGCTGCGCAGGCAGTTTCTCGATTGGGGGGTGTTCCACGTGGAACATCGATTCATGAGTGCCTGGCAGCGCCTGCAGCAGGCCCTGCGGCAACGGAACTC
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| Amino Acid Sequence |
>DNA polymerase III subunit beta
MHFSIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVALEDAAEPGEITVPARKLMDICKSLPSDALISIRLDDQKVVIK SGRSRFTLSTLPANDFPTVEEGPGSLSFTVAQGKLRKLIERSAFAMAQQDVRYYLNGMLIEVSSGMLRAVATDGHRLAMCSMQAGIEQPDRHQVIVPRKG ILELARLLNDQDAEVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQLLREAFSRTAILSNEKYRGIRLQLESGLLKIQANNPEQ EEAEEEVAVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDANSSALVQEFDNDDSAYVVMPMRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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