Pseudomonas stutzeri B1SMN1, B382_17131
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00012, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGCCAGTTCCGACGAGGCCGACCGGGTGGTCGGTCTTGAGCTGGGCGCCGACGATTACCTCGGCAAGCCGTTCAGCCCACGCGAGCTGCTGGCGCGG ATCAAGGCCTTGCTGCGGCGGGTCAGCTTCGCCCAGGAGCGCGGCAGCGACGTGCTGGCCTTCGATGAATGGCGGCTGGACATGATCAGCCACCGTCTGT TTCACGCCGATGGCGAGGAAGTCTTTCTGTCCGGTGCCGATTTTGCGTTGCTCAAGCTGTTTCTCGATCATCCGCAGCAGATCCTCGACCGCGACACCAT TGCCAACGCCACCCGCGGGCGCGAGGTGATGCCGCTGGAGCGCATCGTCGACATGGCGGTGAGCCGTCTGCGCCAGCGCCTGCGCGACACCGGCAAGTCG CCCCGGCTGATCCGCACCGTGCGCGGCTGCGGCTATCTGCTGGCAACCCAGGTGACGCCGCACCATGAATCTGCGCACTGAGCGGCGGCGTCTGCGGCTG
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| DNA Sequence for Gene |
>B382_17131
GTGCCGCGCTCGCTGCTCGGACGCATGCTGTTGCTGACGCTGCTCGCGGTGCTGCTGGCGCAGGGCCTGTCGAGCCTGATCTGGCTATCGCAGCTGCGCG CCAGCCAGATGGAGGGGCTGCTGGCCAGCGCTCGCAGCCTGGCGCAGTCGATGGGGGCGAGCGTCAGCTACTTCCGATCGCTGCCGCTGGGCTACCGACC GCTGGTGCTCGACCAGCTGCGCAGCATGGGCGGCACGCGCTTCTTCGTCTCGCTCAACGACAAGCCGCTGGAGATGAAGATCCTGCCGGAGACGCCACGC AAGCGTGCGGTGCTGCACGAGGTGGAGCAGGTGCTGCGCCAGCGTCTGGGTGGCGCGGTAGACCTGACCATCGAGTTCGTCAGCCCGGACGATCTGCGCA TCTTCAACAGCGGCATCAAGCTCGAGGAACTGCCGCGCTCCTGGGCCCACTACGCGCTGGGCTTCGAACCGCTGGCGCCACCGGTGCTGGTGACGCAGAT CCAGATCGCGCCGCAGGAATGGCTCTATCTCGCCTCGCTGATGCCGGCACCCTACGTCAGCCTGGAAGACGAGGGGCTGCCGGTGCAGCAGCTGTGGTTC ATCGTGCTGACCAGCGCCTTCCTGCTGCTGTTCATCGGCCTGCTGGTGCGCTGGCAGAGCCGGCCATTGAAACGCCTGGCCAAGGCGGCGCGGGAGCTGT CGGTGGGAGGGGAAGTGCGGCCGCTGGCCGAGATCGGTGCCAGCGAGATCGTCGAGGTCAGCCGCGCCTTCAACAACATGCGCGAGCGCATCAGCCGCTA TCTGACCGAGCGCGGCCAGTTGTTCAGCGCCATCTCCCACGACCTGCGTACGCCCATCACACGGCTGCGGCTGCGGGTCGAACTGCTGGAGGACGAGGCC CAGCAAGTCAAGTTCAACCGCGATCTCGACGAACTGGAGCTGCTGGTCAAGGGCGCCCTGCAATGCGTGAAGGACACCGATATCCACGAAAACATCGAGG CCGTGGACCTCAATCTGTTGCTCGAACACATCGTCGAGCCCTACCAGGCCTGCGACCAGACCCGCGTGACCCTGGATGGACGCGCGCTGGCGACTTACCC CGGCAAGCCGCTGGCACTCAAGCGCTGCATCGGCAACCTGCTGGACAACGCTCTGAAGTATGGCGAGCGCGCCCACCTGCACGTCGAGGATGGCAAGGAG GCGCTGGTGCTGCACGTTGACGATGAGGGCCCGGGTGTTCCGGAGCAGCGCCTGGAGCACGTTTTCGAACCCCATGTCCGGCTCTCCGGCCAGCAGCAGG GCTACGGCCTGGGGCTGGGTATCGCGCGCAACATCGCTCACGCCCACGGCGGCGAGCTGAGCATGCGCAACCTGCAGCAGGGAGGGCTGAGGGTGACCCT CACACTACCGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCCCGCCGGGCGTGCCTGTTACCTGTAGCGTGCCTTTGTAACCGGTTGGTGACCATCGGCCATCCCTTCGTTACCCAGTGTCCATTTTTCCGGGCATAG ACTCGGTCCATCGCAAGCGACCCACGACTTGCCGGATAAAAACAAGAAGGTACTCCTCCATGAATGCGATCCATCGTCTCGCTCTTTCCGTTTCCCTTGC CCTGCCATTGCTCGCCCACGCCGGCGAGGTCGAAGTCCTGCACTGGTGGACCTCCGGCGGCGAGAAGCGCGCCGCCGACACCCTGCAGAAGATGGTCGAG CAGAAAGGCCACACCTGGAAGGATTTCGCCGTCGCCGGTGGTGGTGGCGAGGCCGCCATGACCGTGCTGAAGACCCGCGCGGTTTCCGGCAACCCGCCGT CCGCCGCACAGATCAAGGGCCCGGACATCCAGGAATGGGGCGAACTCGGCCTGCTCGCCAACCTCGACGACACCGCCAAGGCCGAACGCTGGGACGAGCT
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| Amino Acid Sequence |
>sensor histidine kinase
MPRSLLGRMLLLTLLAVLLAQGLSSLIWLSQLRASQMEGLLASARSLAQSMGASVSYFRSLPLGYRPLVLDQLRSMGGTRFFVSLNDKPLEMKILPETPR KRAVLHEVEQVLRQRLGGAVDLTIEFVSPDDLRIFNSGIKLEELPRSWAHYALGFEPLAPPVLVTQIQIAPQEWLYLASLMPAPYVSLEDEGLPVQQLWF IVLTSAFLLLFIGLLVRWQSRPLKRLAKAARELSVGGEVRPLAEIGASEIVEVSRAFNNMRERISRYLTERGQLFSAISHDLRTPITRLRLRVELLEDEA QQVKFNRDLDELELLVKGALQCVKDTDIHENIEAVDLNLLLEHIVEPYQACDQTRVTLDGRALATYPGKPLALKRCIGNLLDNALKYGERAHLHVEDGKE ALVLHVDDEGPGVPEQRLEHVFEPHVRLSGQQQGYGLGLGIARNIAHAHGGELSMRNLQQGGLRVTLTLPR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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