Strain | Pseudomonas stutzeri B1SMN1 contig00007, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGCAGCAGCCATTGGCGGCGGCGGTCCTGGTCGTCGCGCTGACGTTGCAGCAACCCGCGTTCCTCGAGTCGATCGAGCTGACCGGACAGCGTCGCGGCGG TCAGGCTCACGCGCCGGCTCAGGGCACTGGCGGTCATCTGCCCTTCACCGGCCAGCACCTGCAGGATCATCAGCTGCACCGGGCTCAGGCCACCGTAACG CGCCAGACGCTTGGCATGCACTTCGGCATCCTGCTGCAGCCGGCGCATGGCCTGGAACAGCGGCAGTTCGAAGGCCTGAACCTCCAGCACATTAATTTCA TTTGAAACTGTTTTTTCAGCCATAAGAACACTTTTCATTGATCCACTCACTTTGACATCAAAGCATTTTTTTGCTTTGGTGTAAAAAGATGACTGACCCG GCCTTAAGCCGATCCAGCGCCGCTGCGCTGGTCCGAAAAGCTGAACTTAGGCGATGACGGGTCAGTCACACTCCCCAACGGCAAAACCGGTAAGGACCTT
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DNA Sequence for Gene |
>B382_13154
ATGTGTGGCATAGCTGGAGAACTTCGTTTCGATAACCGCCCCGCCGATCTGGCCGCGGTTGAACGCATCACCCAACACCTGACCGCACGCGGCCCGGACG CGTGCGGTTTCCACAGCCAGGGGCCGCTGGCCCTCGGCCATCGACGCCTGAAGATCATGGATCTGTGTGAGGCGTCCGGCCAGCCGATGATCGATTCGGC TCTCGGCCTGTCGATGGTCTTCAATGGCGCCATCTACAACTACCCCGAACTGCGCGCAGAGCTGGAAAACCTCGGCTATCGCTTCTTCTCCGAAGGCGAT ACCGAGGTGCTGCTCAAGGGCTACCACGCCTGGGGCGAGGCATTGCTGCCACGCCTTAACGGCATGTTCGCCTTCGCTATCTGGGAGCGGGACCGCCAGC AGCTGTTCATCGCCCGTGATCGCCTCGGCGTCAAGCCGCTGTACCTGTCACGCACCGACCAGCGCCTGCGCTTCGCCTCCTCGCTGCCGGCCCTGCTCAA GGGCGGCGACATCGCCGGTGTGCTGAACCCGGTGGCGCTGAACCATTACATGAGCTTCCATGCCGTGGTGCCGGCACCGGACACCCTGATTGCCGGCATC GAGAAGCTACCCCCGGCCAGCTGGATGCGTGTCGACGCCGATGGCACGACCACCACCGAGCGCTGGTGGGAGCTGCAGTTCGGTGCCCGCGAAGACGAGC GCGACTACAGCTTCGAAGACTGGAAGCGTCTGACCCTGGACACCATGCGCGAAGCGGTGGCGATCCGACAGCGTGCCGCAGTGGACGTCGGCGTGCTGCT GTCCGGCGGCGTCGACTCCAGCCTGCTGGTGGGTCTGCTGCGCGAGGCGGGTGTCGACGACAACCTGCTGACCTTCTCCATCGGCTTCGAAGACGCCGGC GGCGAGCGCGGCGACGAGTTCAAGTACTCGGACATCATCGCCAAGCACTACAACACCCGCCATCACCAGCTGCGCATCCAGGAAAAGGAAATCCTCGAGC AGCTGCCGGCCGCCTTCCAGGCCATGAGCGAGCCGATGGTCAGCCACGACTGCATCGCCTTCTACCTGCTCTCGCGGGAAGTGGCCAAGCACTGCAAAGT GGTGCAGAGCGGCCAGGGTGCGGACGAGCTGTTCGCCGGTTACCACTGGTATCCGCTGGTCGATGGTGCCGAGGACCCGGTGGCGGCCTACCTCGCCGCG TTCCGCGACCGCAGCTACGAGGAATATGCCCAGACCATGCAGCAGCAGTGGGTGCAGGGCGATTTCTCCGGTGATTTCGTGCGCCGCCACTTCGCCCAGC CGGGTGCCGAGGCCGCGGTGGACAAGGCGCTGCGCATCGACAGCACCGTGATGCTGGTGGATGACCCGGTCAAGCGCGTGGACAACATGACCATGGCCTG GGGCCTGGAGGCGCGCACGCCGTTCCTCGATTACCGCGTGGCCGAACTGTCGGCGCGGATTCCGGCGAAGTTCAAGCTGCCCGAAGGCGGCAAGTACGTA CTCAAGGAAGCCGCACGCCAGGTGATCCCCGCCGCGGTGATCGACCGGCCCAAGGGCTACTTCCCGGTGCCGGGCCTCAAGCACCTGCAGGGTGCCACGC TGAACTGGGTGCGCGAGATGTTGCTCGACCCCAGCCAGGAGCGCGGGCTGTATAACCCGCAGATGCTGGAGAAGCTGCTCGCCGATCCGGATGGCCAGCT TACCCCGCTGCGCGGTTCCAAACTCTGGCAGCTGGCGGCGGTCAACCTATGGTTGAGCGAACAAGGCCTCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGCATCGATGAGGTCGCGCCATGGCTAGACGGCCCCAATAACCCGCTCACGAACGGCTGCGGCTGGCACGCGCCACGGGGGCGACCGTTTCGCCCCGCC GCTGGCCGGTTCGTGACTTAGCATCAAGGAACGTACCATGCAGAAGTCCCAAGCCTACGGTCAGCGCCTGCTGCGCGGCCAGGCCCCGACCTACCAGCGG TTGCAGGCACGCTTCGCGGAGGATGGTCAGGAAGAACCCTGTGGGCCCGTGGTCCTGCACTGCGGCTGGGGGCGCATCCTTGTCGGCCACACCTATTCGG ATCCCGCGCAGCTTGCCGCCGAGCTGCTCAACGAGCAGGCCGGCGAACGCGATATCGCGTTGTACGTGGCGGCGCCCCATCAGGTCCTGTCCTACGCACC ACAGCAGCTTTTCCTCGATCCCTCCGACACTCTGCGCATCTGGTTCAGCGACTACCGCCCGTCACAGAAGCCATTTCGCGGCTTCTGCGTGCGCCGCGCC
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Amino Acid Sequence |
>asparagine synthase
MCGIAGELRFDNRPADLAAVERITQHLTARGPDACGFHSQGPLALGHRRLKIMDLCEASGQPMIDSALGLSMVFNGAIYNYPELRAELENLGYRFFSEGD TEVLLKGYHAWGEALLPRLNGMFAFAIWERDRQQLFIARDRLGVKPLYLSRTDQRLRFASSLPALLKGGDIAGVLNPVALNHYMSFHAVVPAPDTLIAGI EKLPPASWMRVDADGTTTTERWWELQFGAREDERDYSFEDWKRLTLDTMREAVAIRQRAAVDVGVLLSGGVDSSLLVGLLREAGVDDNLLTFSIGFEDAG GERGDEFKYSDIIAKHYNTRHHQLRIQEKEILEQLPAAFQAMSEPMVSHDCIAFYLLSREVAKHCKVVQSGQGADELFAGYHWYPLVDGAEDPVAAYLAA FRDRSYEEYAQTMQQQWVQGDFSGDFVRRHFAQPGAEAAVDKALRIDSTVMLVDDPVKRVDNMTMAWGLEARTPFLDYRVAELSARIPAKFKLPEGGKYV LKEAARQVIPAAVIDRPKGYFPVPGLKHLQGATLNWVREMLLDPSQERGLYNPQMLEKLLADPDGQLTPLRGSKLWQLAAVNLWLSEQGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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