Strain | Pseudomonas stutzeri B1SMN1 contig00007, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGATATCCGAGGCGGTTTCGCCGAATGTGGTGGATGCCGAGACCCAGGCCAAGGCGCTTTCGTGTCGGGTACTGGTCGTCGATGACTCTTCCGTGGCGCG CAAGCAGATCGTTCGCTGCCTGGAGAATCTCGGGGTCGAGGTCGTCACGCTGAACGATGGCCGTGAGGCGCTCGACTACCTGAAGCGGATGGCCGACGAC GGCAAGCGGCCGGCGGAGGAATTCCTGATGATGATCTCCGATATTGAAATGCCAGAGATGGATGGCTATACCCTGACTACTGAGGTGCGTCAGGATTCAC GCATGCAGGATATGCATATTCTCTTGCATACTTCGCTTTCCGGTGTGTTCAACCAGAACATGGTGAAGCGTGTGGGGGCGGACGATTTTCTCGCCAAGTT CCAGCCCGACGATCTCGCGGCTCGTGTGGTCGAGCGGATTCGAAAGGCGGATGCAAACTGAGGCTGGTCCTCTCATGGATATGATGGTGAGGCTTTATTA
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DNA Sequence for Gene |
>B382_12914
GTGTCAGTTGATCTGGATTTCGAGCAGTTCCGGGTATTTCTAGAGAAGACGTGCGGCATTCTGCTTGGCAGCAACAAACAGTATCTGGTGTCCAGCCGGC TGAACAAGCTGATGGAGCAGCAGGGCATCAAGACGCTCGGCGATCTGGTCAGGACGATCCAGGCGCAGCCGCGTAGCGGCCTGCGTGAGCAGGTCGTCGA TGCGATGACCACCAACGAGACGCTGTGGTTTCGCGATACCTACCCGTTCGAAGTGCTCAAGAGCCGGGTCCTGCCGGAAATGCTCAAGTCCGGTTCCGGT CAGCGCCTGCGCATCTGGTCGGCGGCCTGTTCATCGGGGCAGGAGCCCTATTCGCTGTCGATGGCGATCGACGAGTACGAGCGTGCCAATCCCAGCCAGC CGAAGACCGGCATACAGATCGTGGCCACCGAGCTGTCGGGCGCGATGCTGGCTGCCTGCAAGACGGCCGAGTACGACAGTCTGGCGATTGCCCGTGGGCT CTCCACCGAGCGCCTGCAGCGTTACTTCGACCTCAAGGCACCCGGGCGCTGGGCGGTGAAGCCGGCCATTCGCACGCGCGTCGAGTTCAAGGTCCAGAAT CTGCTGGACAGTTACGCCGCCCTGGGCAAGTTCGACATCGTGTTCTGCCGCAATGTGCTGATCTATTTTTCCGCCGATGTGAAGAAGGACATCCTCAAGC GCATCCATGCGACCCTGCGTCCGGGTGGCTACCTGTTCCTCGGCGCCTCGGAGGCGCTCAACGGGCTGCCGGAGCTGTACCAGATGGTCCAGTGCAGCCC GGGCATCATCTACAAGGCGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGGCAGAAAACCGTCATGCAAGATGGCGGTTGCGGCAAAACGGCGGAAAAGTCTTGCCGCTTTTGACGCCAGTGAATTGCACGTGCATCGATAAATTC TATTAAATCAATGGCTTGTGTTCTATGGCATGGGCTTTGCTGGAGTATGCGCAAGCAGACTTGTATCCGGCAGAGGGCCAGATTCATGAGCATCAGTTTC GACAAGGCGTTGGGCATTCACGAGAAGGCGCTTGGTTTCCGCTCGCAGCGTGCCGAAGTGCTGGCGAACAACATTGCCAATGCCGATACGCCCAACTACA AGGCCCGTGATCTCGACTTCGACAGCGTGCTCGCCGAGCAGTCGGCGAAGAGCCAGGGCGGCTTCGGCGTCACCCGGACCAGCGACAAGCATATTGCCGC CGAGGGATTGGAGATTGCCGATGCCTCGCTGCGCTTCCGTACGCCGACCCATCCGTCCCTGGACCAGAACACCGTCGATCTGCAGATCGAACAATCCAAC
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Amino Acid Sequence |
>chemotaxis protein methyltransferase CheR
MSVDLDFEQFRVFLEKTCGILLGSNKQYLVSSRLNKLMEQQGIKTLGDLVRTIQAQPRSGLREQVVDAMTTNETLWFRDTYPFEVLKSRVLPEMLKSGSG QRLRIWSAACSSGQEPYSLSMAIDEYERANPSQPKTGIQIVATELSGAMLAACKTAEYDSLAIARGLSTERLQRYFDLKAPGRWAVKPAIRTRVEFKVQN LLDSYAALGKFDIVFCRNVLIYFSADVKKDILKRIHATLRPGGYLFLGASEALNGLPELYQMVQCSPGIIYKAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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