Pseudomonas stutzeri B1SMN1, B382_11891 (flhF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00006, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCTTCAGGCGTTGCTGCAGGAGCAGGTGCCCGTACGGGACATCCGTACCATCGCCGAGGCTATCGCGAATGCGGCCGCCAAGAGTCAAGATCCCGCC GCAATGGTCGCAGCCGTGCGCGTCGCGCTGTCCCGCGCAATTGTGCAGAACGTTGTGGGACTAGAGCCGGAGCTGCCTGTGATCACGCTCGAACCTCGGT TGGAACAGATCTTGCTCAATAGCTTGCAGAAGGCCGGACAGGGCTCCGAAGACGGAATCTTGCTGGAGCCAGGAATGGCCGAAAAGTTGCAAAGGTCTTT GGTAGATGCAGCACAGCGTCAAGAAATGCTCGGCAAACCGGCGGTACTGCTGGTAGCCGGCCCCGTTCGGGCGATGCTGTCGAGATTCGCGCGGCTGGCG GTGCCGAACATTCATGTTCTGGCCTACCAGGAAATACCGGACAACAAGCAAGTCACCATCGTCTCGACGGTGGGTCAGAATTAACCGAGGGTAGAAGGCC
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| DNA Sequence for Gene |
>B382_11891
|flhF
ATGCAGGTCAAACGTTTCTTCGCTGCCGATATGCGCATCGCCATGAAAATGGTGCGTGACGAGCTGGGCGCCGATGCCGTGATCATCGGCAATCGCCGGG TGGCCGGTGGCGTCGAGCTGACCGCAGTGCTCGACTACCCAATGCAGTCCGCTCCTGCAGCGACCAAGCCCAATCCGGCGCTGGAAGCCGAGTTGCGCAA AACGCAGGCGCGCCTTGCCAACGCCCATGCCGATCTGAGCTCGGCGCCTCGCGCGAACATGCAGGATCGTCAACTGGTTGACGAGAAGCCGGCTGCGGCG GCAATCAAGCCGCAAGCCCAGCCTGTCGCTGCGGCCGCTACTGCAGACGCTCGCGCAATCGAAGCGATGCAGTCTGAGTTGCACGGCCTGCGCGAGCTGA TCGAAGTGCAGCTCGGTTCGATTGCCTGGGGGCAGGAGCAGAGCCGCCGTCCGCAGCAGGCCAGCCTTTGGCGCCGTCTGCAGCGCATGGGGCTGCCCGC CGAACTGTCGCGTAGCCTTTTGGAGAAGGTCGCAGGCATCAGCGAGCCCCGCCAGGCTTGGCGTATGGTCCTGGCGCACCTGGCGCAGGCGATCAAGGTC ACGAAGAACGAGCCGCTGGAAGAGGGCGGTGTGATTGCGCTGGTTGGCCCGGCAGGCGTTGGCAAGACCACGACCCTGGCCAAGCTCGCTGCGCGCTATG TGTTGAAATATGGTGCGCAGAACATCGCACTGGTAAGCATGGACAATTATCGGATCGGCGCGCAGGAACAGCTCAAGACCCTCGGACGCATCCTTGATGT GCCCGTACTGCAGATCGATCCGAGCCAGTCGCTGGTCAAGACACTGGCGCCCTTGGCACGCAAGCGCGTGATCCTCATCGATACAGCCGGTCTTCCGGCT AGCGATCCAACCCTGCGCATGCAGCTCGATGCACTGTCCGACCGCGGCGTGAAATCGAAGAACTATCTAGTGCTGGCCGCAACCAGCCAGAGCCAGGTAT TGAAGGCAGCGTGGCACAACTATCGTCGCTGCGGCCTGGCTGGCTGTATCCTGACCAAACTGGACGAGGCAGGCAGCCTCGGCGATGTGCTTGGGCTCAC CATCAGCCAGCATTTGCCGATAGCCTACCTCGCGGATGGACCTCAGATCCCGGACGATCTGCACCTGCCGCGCAGTCATCAATTGGTAAGTCGCGCCGTG AGTTTGCAATCCGGCGAGGAACCGAGCGAAGAAACCATGGCCGATATGTTCGCCGGGTTGTACAACGGTCCGTCACGGCGGGCCGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATGCGACAGCGGTTCCTGAATGAATCAGATGCGCGCCATGCGGGCGCATCGCCGGCCGTATGGCCCCAGCAAGATATAGGCGTGTGAACATGGGTATG CATCCCGTACAGGTGATTGCGGTGACCGGCGGCAAAGGTGGCGTCGGCAAGACCAACGTGTCGGTCAATCTGTCACTGGCGCTGGCCGAACTCGGTCGGC GTGTGGTGTTGCTTGACGCTAACTTGGGGTTGGCCAACGTTGACGTGCTGCTCGGTCTTACCACCAAGCGCACCCTTGCCGATGTGATTGCCGGTGAGTG CGATCTGCGCGACGTGCTGATCCAGGGGCCCGGTGGCATCCGTGTCGTGCCGGCTGCTTCCGGCACGCAGAGCATGGTGCAGCTGTCGTCGCTGCAGCAC GCCGGCCTGATTCAGGCGTTCAGTGATCTCGGTGATGAACTCGACGTGCTGATCATCGATACCGCGGCAGGCATCGGCGATTCGGTCGTCAGCTTCGTAC
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| Amino Acid Sequence |
>flagellar biosynthesis regulator FlhF
MQVKRFFAADMRIAMKMVRDELGADAVIIGNRRVAGGVELTAVLDYPMQSAPAATKPNPALEAELRKTQARLANAHADLSSAPRANMQDRQLVDEKPAAA AIKPQAQPVAAAATADARAIEAMQSELHGLRELIEVQLGSIAWGQEQSRRPQQASLWRRLQRMGLPAELSRSLLEKVAGISEPRQAWRMVLAHLAQAIKV TKNEPLEEGGVIALVGPAGVGKTTTLAKLAARYVLKYGAQNIALVSMDNYRIGAQEQLKTLGRILDVPVLQIDPSQSLVKTLAPLARKRVILIDTAGLPA SDPTLRMQLDALSDRGVKSKNYLVLAATSQSQVLKAAWHNYRRCGLAGCILTKLDEAGSLGDVLGLTISQHLPIAYLADGPQIPDDLHLPRSHQLVSRAV SLQSGEEPSEETMADMFAGLYNGPSRRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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