Strain | Pseudomonas stutzeri B1SMN1 contig00006, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCAGCGTAACGGTAAAGAACAGCGGAGCGCGCGCCGGCGCGACCGTCGTGCAGCTTTATCTGCAGGACCTGGTCGGCTCCAGTGTGCGACCGGTGAAGGA GCTCAAACGCTTCGAAAAAATCCGGCTCGAGCCGGGCGAGACGCGGGTGGTGCGCTTCACTCTGGGCGAGGACGACCTCAGGTTCCACGACGCCCGGCTC GACTACGTGGCCGAGCCAGGTGAATTCGAAGTGCAGCTGGGGCTCGATTCGCGAGCCGTGCAGAGCGAGCGCTTCGAGCTGTTGTAAGAAAATTTCTGTA TGGAGAAACGCCTGCAGTCCGGCAACGCCGTCGCACCTGTCGCGCGCGGCACAGCGGCTGGGCTCGGGTGGTTCACCACAGCGAAGCAGAGCGAACTCTG CACAAACGTGTAATTCGGAGGCGGTGTGTTACGCATTTTTCAACGGAAGACGGGTACCCATCCGGCGCGCATGCTGGCAGGGCTGGCAGGTGGGTTGTAC
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DNA Sequence for Gene |
>B382_11136
ATGCTGATGGCCGGCAGTGCGCTGGCGTTCAGCCTGGATGATGTGGCCAAGCAGGCGCAGGAACTGGCGTCCCGCGGCTATGAGGAACCGGCGAGCAACC TGCCGGAAGAGTTTCGCCGAATGGCCTTTGCCGATTACCAACGGCTGCGCTTCGACCCCGAACATGCCTACTGGAAGGATGCCAATACACCGTTCCACCT GCAGTTCTACCATCAGGGCATGCACTTCGACACACCGGTACGCATCAACGAGATCACCGCGACGGACGTCCGCGAGATCCGCTATGACCCGGCCATGTTC CAGTTCGACGGCGTCGAGGTCGATCCCGCCGCGCTGGAAGGTCTGGGCTTCGCCGGTTTCAAGGTGCTCTATCCGCTGAACAAGAAGGACAAGCAGGACG AGGTGATGACGCTGCTCGGTGCGAGCTATTTCCGCATCGTTGGCAAGGGCCAGTGGTATGGCCTGTCCGCACGCGGGCTGGCGATCGACACGGCGCTGCC GGTGGGTGAGGAGTTTCCCCGCTTCCGCGAGTTCTGGGTGGAACGGCCGCAGCCCGACCGGCGCAACCTGGTCATCTACGCGCTGCTCGACTCGCCGCGT GCCACCGGCGCCTACCGCATGGTGCTGACGCCGGGCAAGGACAGTACGCTGGACGTGCAGGCCCGGGTGTACCTGCGCGAGCCGGTGGGCAAGCTGGGCA TCGCGCCGCTGACCAGCATGTACCTGTTCGGGGCGAACCAGCCCAGCGATTCGCTGAATTTCCGCCCGCAGCTGCACGACTCCGAGGGGCTGGCGATCCA CGCCGGCAACGGCGAGTGGCTCTGGCGCCCGCTGAACAACCCGCGTCGCCTGGCGGTCAGCGCGTTCAGCGTGGAGAATCCGCGTGGCTTCGGCCTGATG CAGCGCACCCGGGAGTTCAACCGCTACGAGGACCTGGACGACCGCTACGAGCTGCGCCCGAGTGGCTGGGTTGAGACGCGCGGTGACTGGGGCAAGGGGC ATGTCGAGCTGGTGGAGATCCCGACGCCCGACGAAACCAACGACAACATCGTCGCCTTCTGGTCGCCCGAGAAGCAGCCGGAGCCCGGTCAGCCGCTGGA CCTGGAGTATCGCCTGCACTTCTCCATGGACGAACCGAGTCTGCACGATCCGCAACTGGCCTGGGCACAGCAGACCCGCGTGTCGGCCGGGGACGTCAAG CAGGCCAACCTGATTCGCCAGGCCGATGGCAGCACCGCTCTGGTGGTGGACTTCGTCGGGCCGGTGCTGGCCAAGCTGCCCGAGGATGCGCCGGTCACCA CCCGCGTCAGCGTCGATGACAACGCCGAGCTGGTGGAGAACAACCTGCGCTACAACCCGGTCAGCAAGGGCTGGCGCATGACTCTGCGGCTCAAGGTGCG TGATCCGCGCCGGCCGGTGGAAATGCGTGCGGCGCTGGTCGATGGTGAAAAGACCCTTTCCGAAACCTGGACCTACCAGATTCCTCCCCATGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAGGACGCAATGAACCGCATGGCTGAAGGCTATTGCGATGGCCTGGCGCTGAACGACGTCGAGGACCCGGCCAGATACCGGCAGGCCGCGGAGCAGGGC GGTCTGCTCGCCCTGCATGACGAAATGTCCGCCGCGACGACCGCCGAGCGCGGCCCGTCGCGGCGTCTGCTGGACTCCGTGGTGACCCGGCTGCGCATGG GCTGGGGCGATCTGTTCGACCGCGCCGGCATCATCCGTGAGGACCATCAGGGCCGCCCCTATCTGCAATCCACCCCGCCGATCGTTCGCACGCGGATGGT GCCGGAGCCCTGGCACACCAACATCTTGCGTCGCGGTTGGCGCCGGCTGCTGGGGCGCAAGACTCCGCGGCGCACGTTCGAACCCAGCCCGCAGCCGCTC GACGAAGCACGCTGGCGGCGCGTCGCGGCGCTGCGGCGCAGCGCATTGCTGATTCTGATGCTCGGCCAGACCGCGTTCGCCACCTGGCAGATGAAGGCGG
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Amino Acid Sequence |
>glucan biosynthesis protein G
MLMAGSALAFSLDDVAKQAQELASRGYEEPASNLPEEFRRMAFADYQRLRFDPEHAYWKDANTPFHLQFYHQGMHFDTPVRINEITATDVREIRYDPAMF QFDGVEVDPAALEGLGFAGFKVLYPLNKKDKQDEVMTLLGASYFRIVGKGQWYGLSARGLAIDTALPVGEEFPRFREFWVERPQPDRRNLVIYALLDSPR ATGAYRMVLTPGKDSTLDVQARVYLREPVGKLGIAPLTSMYLFGANQPSDSLNFRPQLHDSEGLAIHAGNGEWLWRPLNNPRRLAVSAFSVENPRGFGLM QRTREFNRYEDLDDRYELRPSGWVETRGDWGKGHVELVEIPTPDETNDNIVAFWSPEKQPEPGQPLDLEYRLHFSMDEPSLHDPQLAWAQQTRVSAGDVK QANLIRQADGSTALVVDFVGPVLAKLPEDAPVTTRVSVDDNAELVENNLRYNPVSKGWRMTLRLKVRDPRRPVEMRAALVDGEKTLSETWTYQIPPHE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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