Pseudomonas stutzeri B1SMN1, B382_09242 (ompR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAAAGTCGAAACGACCAACGAGGCGCCTGCCTTCAAGAGCAAACCGGGGCTTGGGCGCATCGCCAAGGCGGCTGGCTATTCCTTTGCCGGCCTCGCCGC AGCCTGGCGGCATGAGGCGGCCTTTCGTCAGCTGGCCCTGCTTGCCTGCGTGCTCATTCCTGTTGCCTTCATGGTTGGCAGCACCCCCGTGGAGCGTGCC CTGCTGGTCCTGCCGGTGCTGATGTCGCTCGCCATCGAACTGGTGAATTCAGCCATCGAGGCGGTGGTCGATCGGGTGTCGCTGGAAATCCATCCGTTGT CCAAGCGCGCGAAGGATCTGGGAAGTGCGGCTCAGCTGCTCGGGCTCATTTCCATTGCCGTCGTCTGGCTCGCCGTCCTGCTCTGAAGCCCCCGAGGCGC GCGGGGCAAGACGGTTGCGCGAAAAATCTGCTAACAATGGCTGTCAGTAGGGCCGAACCACACTGCGCAATAATGCGCCGTCGACCATCTGGGAGTTTCC
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| DNA Sequence for Gene |
>B382_09242
|ompR
ATGAGCAGCACTGCGCAAGCCAACGAAGGCGAAAAGATCCTTATCGTCGATGACGATGCCCGTCTGCGGCGTCTGCTCGAGCGCTTTCTCGACGAGCAGG GCTACCGCGTCCGTACCGTGGAAAACACCGAGCAGATGGACCGCCTGCTCAGTCGCGAGCTGTTTCAGCTGGTGGTGCTGGACCTGATGATGCCGGGCGA GGACGGGCTGTCCGCCTGCCGCCGGCTGCGGGAGGCGAACAACCAGATCCCGATCATCATGCTCACCGCCAAGGGCGACGAGGCCAGCCGCATCCAGGGC CTGGAGCAGGGCGCCGACGACTACCTGGCCAAGCCGTTCAACCCTCGCGAGCTGCTCGCGCGCATCCGTGCGGTGCTGCGCCGGCAGGCGCCGCAGGTGC CCGGCGCCCCGGCCAGCGAGGACGAGACCGTCACCTTCGGCGAATACGAGCTGTCGCTGGCGACCCGCGAGCTGAAGAAGGGCAACGAGGTGCACATGCT CACCACCGGTGAGTTCGCGGTGCTCAAGGCGCTGGTGCAGCACGCTCGCGAGCCGCTGACCCGGGACAAGCTGATGAACCTCGCCCGCGGCCGCGAGTGG GATGCGCTGGAGCGCTCCATCGACGTGCAGATCTCCCGCCTGCGCCGGCTGATCGAACCGGACCCGTCCAAACCGCGCTACATCCAGACCGTCTGGGGTG TGGGTTACGTGTTCGTGCCGGACGGCAACAAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCGACCACGGCGTGCCACCGGCTGCGGGCGCGATAGCCTCGTTACCCGCAGCCCGAGGCGTGCCGCCGCTTTTTCATGAAGCCCCCGCTCTGGTTCCCG CAAAGCTTCTTCGCCCGCACCCTGTGGATGGTGCTGATCGTTGTGCTGTTCTCCAAGGTCCTCACCCTGGTCTATCTGATGACCAACGAGGACGTGCTGG TGGACCGCCAGTACAGCCACGGGGCGGCGCTGACCCTGCGCGCCTACTGGGCTGCCGACCTGGAGGACCGCGACCGCATCGGCCGAGCCGCCGGCCTGCA ACTGGTGGCCGAGCAGAACGTGCCGCGCAGCGAGTATCACTGGCCCTACACCGAGATCTTCCAGCGTCAGATGCGTGACGAGCTGGGCGACGATACCGAA GTGCGCGTGCGCATCCAGCCGTCCACGGCGATCTGGGTGCGCGCGCCGAATCTGGGGCCCGACTGGGTGCAGGTGCCGCTCTATGCCTATCCGCTGCGTG
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| Amino Acid Sequence |
>chemotaxis protein CheY
MSSTAQANEGEKILIVDDDARLRRLLERFLDEQGYRVRTVENTEQMDRLLSRELFQLVVLDLMMPGEDGLSACRRLREANNQIPIIMLTAKGDEASRIQG LEQGADDYLAKPFNPRELLARIRAVLRRQAPQVPGAPASEDETVTFGEYELSLATRELKKGNEVHMLTTGEFAVLKALVQHAREPLTRDKLMNLARGREW DALERSIDVQISRLRRLIEPDPSKPRYIQTVWGVGYVFVPDGNK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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