Pseudomonas stutzeri B1SMN1, B382_07982
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCTGGGCATCGAGCTCGATGAGATTTCCACCTCGCGGGTGGTGATGCACCTGCCAATGAGGCCCGAGCTGGTCGGCAACTTCGTCCATGGCATCCTCCA CGGCGGCGTGATCGCCTCGCTGCTCGACGTCGCCGGTGGCGCCATGGCGATGCTGGGCGCCTTCGACAAGCATCGTCACCTGACCATGCAGGAGCGCGCC GCCCGCCTGTCCCGCCTCGGCACCATCGACCTGCGCATCGACTATCTGCGCCCCGGCCGCGGTACGCGCTTCACTGCCAGCGCGACCCTGCTGCGCTCGG GCAACAAGGTCGCGGTGGTGCGTTCGGAGCTGCACAACGAATCGGACACGCTGATCGCCGTGGGCACCGGCACTTATCTTTGCGGCTGACCGGCCGATAG GAGATTGGCGGCCGGGGTGCGCTCTCGTACACTCTGCCGCACATGGCCATGAGCCATCATCTCCACGAGGCAGGACGCCCGACAGTTCGAGTGCCGCCGC
|
|
| DNA Sequence for Gene |
>B382_07982
GTGTCCAGACTGCTGTTTTCCGACCTGCCCGCCGACCAAGTTGCCCTGCTCGGGCATAGCCACGACCCGCTGCTGGTCGTACTCTCCTATCTGATCGCCA GCGCCGCGGCCTTCACCGCCCTGGCCCTGGCCAAGCGGGTCAGCCGCAGCAGCAGCCCGCGCGGGCGCGAGCTCTGGCGCTGGGTCGGCGCCTTCGCCCT GGGCGGCGGAATCTGGTCGATGCATTTCATCGGCATGCTGGCCTTCCGCGCGCCGCTGGACATTCGCTACGAGCACGGCATCACCGCCCTTTCGCTACTG ATCGCCGTGGCGGTGTCCTATGTGGTGATGCGCGTGCTTGGCCGCGATCGGTTGAGCGTGGCGCAGTACGCCCTGGCCGGGACTGCTGCCGGCATCGGCA TTGCGGCGATGCATTACACCGGGATGGCCGCGATCCGTTCGCTGGCCACGCTGTACTACGCGCCGCTGGCCTTCGCCGCCTCGGTGCTGATCGCCATCGG CGCCTCCATCGCCGCATTGGTAATGGGCTTCCACTTCAGCAGCAGCCAGAGCCGCCATCAGCGTTGGCAACGCCTGCTCTGCAGCCTGGTGATGGGCGCG GCGATCGTCTCCATGCACTACACCGGGATGCACGCGCTGACCCTGGCTGTCCCCGCCGGTCTCGTGGAGCATGCCACGCCATTCGGCAGCCACACCGGCC AGGGCGCCCTCGCCTCGGCGATCGGCCTGGTAGCCCTGCTGGTAATCGTCACCGGCATCGCCGCGAGCTGGGCCGAACAGCGCTTCAGCGAGCAGCGCCA GGCGCTCGATCTGGCCGAGCACCAGCTCAATGCGATGACCCACTATGACCCGCTGACCAACCTGTTCAACGGCCGTGCCTTCACCGAGATGGTCACCCAG GTGCTGGCCGTGCGCGCGGAACGCCAGGCGCTGGCCGTACTGGTGGTGGACCTGGACAACTTCAAGCGCATCAACGACAGCCTCGGTCACCGCAGCGGCG ACCTGGCGCTGCAACAGGCGGCGCAGCGCATTCGCGCGGTGCTCGGTCAGCACGACATGCTGGCGCGCTTCTCCGGCGACGAGTTCTGCGTGCTCACCCT GGGCGCATGGGAGCACGCCCAGGCACTGGCCAACCGAATCCTCGAGCAGCTGCGCCCACCGTTCGTCCTCGGCGACACCCAGCTGCGCCTTACGGCCAGC ATCGGCATCAGTCAGTACCCGGAGGATGGCCTCAACTTCGATGCCCTGTTCCGCCACGCCGGCCTGGCCGTCGGACAGTGCAAGGCCAGCGGCCGCAACC GCAGCCTGCGCTTCAACCCGGCTCTGGAACTGCGCGCCCAGGAAGACCTGTCGTTGGAGCAAGACCTGCGCCGCGCGCTGAACGAGAACCTGCTCAGCGT GCACTACCAGCCCATCGTCGACGGCCGCAGCGGGCGTCCGGTGAGTCTCGAAGCATTGGTGCGCTGGCAGCATCCGCAGCAGGGATTCATCAGTCCGGAG CGCTTCGTCGGGCTGGCCGAGCAGCACGGTTTCGTCGCCGAGCTGGACACCTGGGTGGCGCGCCGTGCCTGCGCCGACCTGGCCGTGCTGTTGGGCGAAG GTCACGATCTGCGCATGGCGGTCAATTGCTCGGCGCTCAACCTGTCCAACCCGCAGATGCCCACGGTGGTTGCGCGGATTCTCGAACGCACGGGGCTGGA GCCCGCGCGGCTGACCGTGGAAGTCACCGAGAACGCCCTGATGAACAGCCTCGGCGCGGCGATTCGCACGCTGGATGCGGTGCGCGAGCTGGGCGTGAAG GTTTCGATCGATGACTTCGGCAGCGGCTATTCCTCGCTCGCCTACCTGCGTCAGCTGCCGGTCGATACGCTCAAGGTCGACCGTGCGTTCGTTCGGGAAA TTGCCGAGCAGGCCAACGACCGCGCCATCACCGCTGCGATCATCGCCATGGCGCACAAGCTGGGGCTGAAGGTGGTGGCCGAAGGGGTGGAAGAGGTGGT GCAGCTCGACTACCTGCGCGAGAACGGCTGCGACTTCATCCAGGGCTACTACTACAGCCGGCCGCTGCCGTTACCGGCGCTGCGCGACTGGCTGGCCGAG CGGCCACTCACTGCGACCGTGACAACCGCGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAAGCGGTCCAGCGCATTGGCGAACGCCTGTCGGTCACGCTCGCCGTAAGCTGCCTGGCCGCCACCCATCTGCCCCTGATCGCGCAGATCGGTGAACAG GTTGCGCACCGCCAGGCGCTCGCCCATGTTTCGCTCGTCGAACTCGCGCCCGCGCGGGTCGAGTGCGGCGACACCCTTCTTCACCAGCCGGTCGGCCAGC GGCACGTCGCTGCAGATCACCAGGTCACCGGGCTCGGCATGCTCGACCAGATAGTCGTCCGCGGCATCCGGCCCGCTCGGCACGACGATCAGGCGCACAC AGGCGAACGCCGGCTTGACCTGGCTCTGCCCGGCGACCAGCAGCACCTCGAACTTGCGTTTGAGGGCGAACTTGATCACCTGATCCTTGGCTGCGCGCGG GCAGGCATCGGCGTCGATCCATACGCGCATCGGAACCGCCTCGCTCATGCCGCGGCGCGCCGAACGGTCGCCAGCAGGGCCGCCGCCCCGGCGAACATGG
|
|
| Amino Acid Sequence |
>diguanylate cyclase
MSRLLFSDLPADQVALLGHSHDPLLVVLSYLIASAAAFTALALAKRVSRSSSPRGRELWRWVGAFALGGGIWSMHFIGMLAFRAPLDIRYEHGITALSLL IAVAVSYVVMRVLGRDRLSVAQYALAGTAAGIGIAAMHYTGMAAIRSLATLYYAPLAFAASVLIAIGASIAALVMGFHFSSSQSRHQRWQRLLCSLVMGA AIVSMHYTGMHALTLAVPAGLVEHATPFGSHTGQGALASAIGLVALLVIVTGIAASWAEQRFSEQRQALDLAEHQLNAMTHYDPLTNLFNGRAFTEMVTQ VLAVRAERQALAVLVVDLDNFKRINDSLGHRSGDLALQQAAQRIRAVLGQHDMLARFSGDEFCVLTLGAWEHAQALANRILEQLRPPFVLGDTQLRLTAS IGISQYPEDGLNFDALFRHAGLAVGQCKASGRNRSLRFNPALELRAQEDLSLEQDLRRALNENLLSVHYQPIVDGRSGRPVSLEALVRWQHPQQGFISPE RFVGLAEQHGFVAELDTWVARRACADLAVLLGEGHDLRMAVNCSALNLSNPQMPTVVARILERTGLEPARLTVEVTENALMNSLGAAIRTLDAVRELGVK VSIDDFGSGYSSLAYLRQLPVDTLKVDRAFVREIAEQANDRAITAAIIAMAHKLGLKVVAEGVEEVVQLDYLRENGCDFIQGYYYSRPLPLPALRDWLAE RPLTATVTTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|