Pseudomonas stutzeri B1SMN1, B382_02410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGATGGCCTCGACCGTCAGGTTGCGCAGGGCGATCAGGGCCTGCAGCGGCTGCTGCTGATTGCAGCTGCACAGACGCTCGGTCATCTGCTCAGGCGGCA GGCGGATCTGATTGAGCATCTCGTGGAACAGGTGCGCCTTGTTCTGGAAGTGCCAGTACACGGCGCCGCGCGTCACGCCAGCGTCGCGCGCGATCTGATC GAGACTGGTGTGGGCTACTCCCTTGTCCAGAAACAGCCGCTCGGCGGAGGCGAGGATGGCGATGCGGGTCTTCTCGGCTTCTTCTTTGGTTCGGCGCATG GGCAGGTTCGGCGGTAGCGGCTGCTTCAGGCATCCAGCAGCGGTGGAGGCGACCAGTGTAACGAGGCATCTCGTCGCGATGCATGTTTACAATCGGCGGT GTATGTAACAGCATCTTGCACGCCGGTGCAATTGCCCCACCGAGGCCGCGGTCCAAGCATTGGCCTCGGCACGTCCCTTTTCCTGCTTTGCGAGCCTCTG
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| DNA Sequence for Gene |
>B382_02410
ATGTCTTTGCGGATTCTGCTCATCCTGGGCGCGCTCAGCGCGTTCGGTCCCCTGGCCATCGACATGTACCTGCCTGCATTTCCGCTGATCGCGCAGGCCT TTGGTACCAGTGTCGATCACGTCCAGCTGTCGTTGGCGGCATATTTCATCGGTCTGGCCATCGGTCAGCTGGTCTACGGTCCGCTGGCCGATCGCTACGG GCGGCGGGGGCCGCTGCTGGTGGGCGTGACCCTGTTTACCCTGGCATCACTGGCCAGCGCCTTCGCACCGTCGATGGACTGGCTGATCGGCGTGCGCTTC GTGCAGGCGCTGGGTGGCTGCGCCGGCATGGTGGTGGCGCGGGCCGTGGTGCGCGACCTCTGCGATCCGATGACCAGCGCCAAGGTGTTCTCACAGCTGA TGCTGGTCATGGGCCTGGCGCCGATCCTCGCGCCGGTGGCCGGCGGTGCGTTGCTGGCGACGTTCGGTTGGCCGTCGATCTTCATCCTGCTGACGTTGTT CAGCGCGCTGTGCCTGGTGGCGGTGGCGCTCTGGCTGCCGGAAACCTACCCGCCGGGCTTGCCGCGCCAGCCGATGGCCGGGGCCCTGAGTCAGTACTTG CGGTTGTTCCGCGATCGTTTCTTCATGGGCCACGTGCTCACCGGCGCGCTGTGCATGGCGGGGATGTTCGCCTACATCACCGGCTCGCCGTTCGTCTTCA TCGAGCTGTACGGCGTCAAGCCCGAGCATTTCGGCTGGCTGTTCGGTATCAATGCGGCGGGCTTCATCCTGATGGCGCAGGTGAACGTGCGGCTGGTGCG CTGGCGCGGGCCGGAATTCTGGGTGCGGCGCTGGGTGTGGTTCTTCTTCGCCAGTGCGCTGGCATTGCTGGCAGTGGCGGCGGCGCAGCCCGAATCGCTC TGGCCCTTGCTGATCCCGCTGTTCTGTTGTGTGTCCTGCCTGGGCTGCCTGCTGCCCAATGCCACCGCCTGCGCCATGGCCGATCAGCGCGCCAATGCCG GCAGCGCCTCGGCTCTGCTCGGCAGCCTGCAGTTCACCATCGCGGCCATTGCCGCTTCCGCGGTGGGGGCGCTGCACAACGGCACCGCGGTGCCGCTGGC GGCGATCATGAGTCTGTGCGGGCTGCTGGCGACATTGGTCGCCTATGGCACCGCCCGCGCCAGCACGGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCAGGCGCTCAGCGGCAGCCGATGGGGCGCCTGCAGGCGCCGCTGCAGGGTCTCGGCGAAGGCCCTGGCCTCGGCTTCGCTGCGAAAGGTGATGCGCT GGCGATCCAGGCAGACCTGCCAGGCGCTGTCGGGGTGGGGCGTCATGGGGCGGACGAGAATGTGCATGGCGATCTCCTCACGTGTCGAACGCCGCACAGT CTAGGCGCAGCCATGGCCCGTGCGGCGAGCCATGGTGTCGCAGGTCGGCCTTGCGCCGACGAATGGCTCAGTATGCCAGGCGGGCGTCCAGGCTGTTCTG CGCCAGGCGGCGGGCCTGGGCTTCGGTCATGCCCAGGCTTTCGTGCAGCGCGACGAAATTCTCCGTGACATAGCCGCCAAAATAGGCCGGATCGTCCGAA TTCACCGTGACCTTCACGCCCTGCTCCAGCAGGTCGAGGATGTTGTGCTGACGCATGTCGGCAAACACCTTGAGCTTGGTGTTGGACAGCGGGCAGACCG
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| Amino Acid Sequence |
>MFS family transporter
MSLRILLILGALSAFGPLAIDMYLPAFPLIAQAFGTSVDHVQLSLAAYFIGLAIGQLVYGPLADRYGRRGPLLVGVTLFTLASLASAFAPSMDWLIGVRF VQALGGCAGMVVARAVVRDLCDPMTSAKVFSQLMLVMGLAPILAPVAGGALLATFGWPSIFILLTLFSALCLVAVALWLPETYPPGLPRQPMAGALSQYL RLFRDRFFMGHVLTGALCMAGMFAYITGSPFVFIELYGVKPEHFGWLFGINAAGFILMAQVNVRLVRWRGPEFWVRRWVWFFFASALALLAVAAAQPESL WPLLIPLFCCVSCLGCLLPNATACAMADQRANAGSASALLGSLQFTIAAIAASAVGALHNGTAVPLAAIMSLCGLLATLVAYGTARASTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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