Strain | Pseudomonas stutzeri B1SMN1 contig00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCCAGCATATCGAGGCGAGCTTCGAGTCGGCGCTGTCCCAGGCCGTGGGGCGCCATAGCCAGTGGCAGGTGCGGCAGGTCCGCCCGGGTGAGCCGGTTC GCTGCGGCGAGGTGGTAATCGCCCCGATCAGTGAGGAGCTGGCGTTCGAGGACGATGGCAGCGCGCGCCTGACCGGCCGCTGCTGGCCAGAGCCGTACAG CCCCTCGATCGACCAGATGATGCTGAACCTGGCCCAGCAGTTCGGCGGCCGCTGCGGTGTCATCGCCTTCAGCGGCATGGGAAGCGACGGCAGTGCCGCG GCGGCGTACGTGCTGCGTCAGGGCGGCAAGGTATGGACGCAGCGCGCCGACTCCTGCGCCTGCTCGAGCATGCCGGACAACCTTCGCGAGGGCGGCTACA GCTCCTACAGCGGTGATCCACGAGAACTGGCGCAGGCACTGGTCAATCATCTGGTGAACCAGGCCGGGGCGCCCACCACGTCTTTTCAACGGGATAATTC
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DNA Sequence for Gene |
>B382_00600
ATGAGTCAGACGGTCATTTCTCAGGACGCGGAAAGCCTTACCGGGCTGCTGATGCCGCTTGCCGATCGCATGCTGCTGGTACCCAACGTGGCGGTAGCCG AGCTGATTCCGTACCGTGCGCCACAGGCGGTACAGGGCATGCCGGCCTGGTTTCTCGGCCAGGTGCAGTGGCGCGACCTGAGTCTGCCATTGCTGTCATT CGAGGCCGCCTCCAGCGGCGAGCCGCAGCCGGTGGGCAGCGCCGCGCGGGTGGCCGTGCTCAACGCTGTCGGCGGGCGCGATCACGTCAAGTTCATTGCC CTGCTGGTGCAGGGCATTCCGCACTCGATCAAGGTCGATGCGAGCCTGGCGCGGGCGGACGTAGAACTTGCACCGCTGGAGCTGGATGCGGTCAACCTCG GTGATATGCAGGCACGTATTCCCGACCTGGTCGGCCTGGAGCAGAAGCTGGCAGACGCCGGCCTGATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGCGGTCCGTGGCTAGAAGTCGCCCCACAGCTGCTGCGCCACGCTCAACGCCACCACCGGTGCGGTCTCGGTGCGCAGTACGCGCGGGCCGAGCCGGGC CGGCAGAAACCCCTGGCCGCTGGCCAGCTCGACTTCGCTATCGCTCAGGCCACCCTCCGGGCCGATCAGAAATGCCAGGCTCTGCGGCTTGGCATGGCTC GCCAGCGGCTCGGCCACCGGGTGCAGCACGAGCTTGAGGTCGGCCTCGACGTCCAGCCAGTCGCGCAGCGTGACCGGCGCATGGATGATCGGCAGTACCG AGCGGCCGCACTGCTCGCAGGCGCTGATGGCGATCTGTCGCCAATGGGCCAGGCGCTTGTCGGCGCGCTCATCGTTGAGGCGAACCTCGCATCGCTCGCT GATCAGCGGGGTGATTTCGCTGACGCCCAGCTCGGTGGCCTTCTGGATCGCCCAGTCCATGCGTTCGCCACGGGACAGGCCCTGACCGAGGTGGATTCGC
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Amino Acid Sequence |
>chemotaxis protein
MSQTVISQDAESLTGLLMPLADRMLLVPNVAVAELIPYRAPQAVQGMPAWFLGQVQWRDLSLPLLSFEAASSGEPQPVGSAARVAVLNAVGGRDHVKFIA LLVQGIPHSIKVDASLARADVELAPLELDAVNLGDMQARIPDLVGLEQKLADAGLI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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