Strain | Pseudomonas stutzeri NF13 contig00108, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CACCTGGTCGAGGCGCTCGAAGCGGTTGATCTTCGGCACATCACCGACGAACGACCAGACGAACCCCGCCGGATCCTCCAGCTGCAACCAGGCACGCGCG TTGCTGCGCGCCGCCTCGAGCTTGCGCCGGTTGCGGATGATGCCGGGATCCTGCATGCGCTCGTCGATCTCGGCATCGCTCATGTGCGCCAGGCGCTCGG CATCGAAGCCGAACAGCACCTGCCGATAGCGCTCGCGCTTGCGCAATACGGTGATCCAGGAAAGCCCCGCCTGAAAGGCCTCGAGCAAGAGGAATTCGAA CAGCACCTGCGGATCGCGGGCCGGTACGCCCCATTCGCGATCGTGGTAGTCGATGTACAGCGGGTCCGTGCCGCACCAGGCGCAACGTGGCATGTGGTCT CCTTGCGCAGGCCTCGTCCGATGGCCTAAACCATCGCAAGCGCAGCCATGCGGGGGGTATACTCCGAGGCTTTCTGTCGAAGCCCAGCACAGGTGAAATT
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DNA Sequence for Gene |
>B381_20726
|glyQ
TTGAGCCAGACTACGCCTGCCGTGCGCACCTTCCAAGACCTGATCCTCGCCCTGCAAAGCTACTGGGCCGAGCAGGGTTGCGTGGTCCTGCAGCCCTATG ACATGGAAATGGGCGCCGGTACATTCCACACCGCCACCTTCCTGCGCGCCATCGGTCCCGAGACCTGGAACGCCGCCTATGTTCAGCCTTCGCGCCGTCC GGCCGACGGCCGCTACGGCGAGAACCCCAACCGCCTGCAGCACTACTACCAGTTCCAGGTCGTGCTCAAGCCCAACCCGGACAACATCCAGGACCTGTAC CTGGAGTCGCTGCGCCGCATCGGCGTCGACACCTCGGTGCACGACGTACGTTTCGTCGAGGACAACTGGGAGTCGCCGACCCTCGGCGCCTGGGGTCTGG GCTGGGAAGTCTGGCTCAACGGCATGGAAGTCACCCAGTTCACCTACTTCCAGCAGGTCGGCGGCGTCGAGTGCTACCCGGTCACCGGCGAGATCACCTA CGGGCTCGAGCGCCTGGCCATGTACCTGCAGGGTGTCGACTCGGTGTACGACCTGATCTGGGCCGATGGCCCGTTCGGCACCGTGACCTATGGCGACGTG TTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAGCACGCCAACGTGCCGAAGCTGTTTGAACTCTTCGATTTCTACGAGAGCGAAGCCAACC GCCTGATGACCGCCGAGCTGCCACTGCCGGCCTACGAGATGGTGGTCAAGGCCTCGCACACCTTCAACCTGCTCGATGCTCGGCGCGCCATCTCGGTGAC CGCGCGCCAGCAGTACATCCTGCGCGTGCGCAGCCTGGCGCGCTCGATCGCCCAGAGCTACCTGCTGGCCCGGGCCAAACTCGGCTTCCCCATGGCCACC CCCGAACTGCGTGACGAAGTGCTGGCCAAGCTGGAGGCTGCAGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGCACTGGATTTCCTCGTCGAACTGGGTACCGAAGAACTGCCACCGAAGGCGCTCGCCAAGCTGGCCGAAGCCTTCTGCGCCGGTATCGAGAAGGGTCT GAAGGACGCCGGCCTGGACTTCGTCAAGGCCCGCGCCTACGCCGCGCCGCGCCGCCTGGCGGTGCTGGTCGAGCAGCTGGCGACGCAGCAGCCCGATCGC AGCATCAACCTCGACGGCCCACCGCTGCAGGCGGCCTTCGACGCCGAAGGTGAGCCGACCCAGGCCGCGCTGGGTTTCGCCCGCAAGTGTGGCGTGGACC TGGCCGAGATCGATCGCAGCGGGCCGAAACTCAAGTTCAGCCGCACCATCGAGGGCCAGCCGGCCGCCCAACTGCTGCCAGGTATCGTCGAAGCCTCGCT GAACGACCTGCCGATTCCCAAGCGCATGCGCTGGGCCGCCCGCAAGGAAGAGTTCGTCCGCCCGACCCAGTGGCTGGTGATGCTGTTCGGTGAGCAGGTG
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Amino Acid Sequence |
>glycyl-tRNA synthetase
MSQTTPAVRTFQDLILALQSYWAEQGCVVLQPYDMEMGAGTFHTATFLRAIGPETWNAAYVQPSRRPADGRYGENPNRLQHYYQFQVVLKPNPDNIQDLY LESLRRIGVDTSVHDVRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGVECYPVTGEITYGLERLAMYLQGVDSVYDLIWADGPFGTVTYGDV FHQNEVEQSTYNFEHANVPKLFELFDFYESEANRLMTAELPLPAYEMVVKASHTFNLLDARRAISVTARQQYILRVRSLARSIAQSYLLARAKLGFPMAT PELRDEVLAKLEAAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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