Pseudomonas stutzeri NF13, B381_19971 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00099, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTACTTCGAAGAGCACCATGTACCACCACTGCACGAGGAACAGCAGCAGCGTTCCAAGACCGATGCCGAAATTGCCCAGCATCCCCAGGATGATGAAG AGGGTCAGCAGGATGGCGGCACGGATCGCCAGGTCGATGGCAAAGGCCAATGCGCGGGGTACGAGGCCAGCCGGACGCAGGAGCAGATCGATGCCCTCGG GTGTCTCCACGCGATGGCTATTGTCGAGCAGCGATGGTCGGTCGAGAGCTGAAAACAAGGGTAAAGTCGTCTGAGGCAGGCAAAGGTCGATGCTATGCGG CAAGTCCCGCTGCGGCAATGCGCCTGAATCTCCCTGTGGGAGGTGGGCGAGCCGATGGGGTGTGATTATGGCGAAGTGCCTGCTTCTTTGCAGGATGTCG TTCGCATACCCAAAAGCCGCGCAGGTAGATCGGCTGCACGCACGCGGCGATGTGCCGCCCTGGCTGATAGACTGCCGCGCTGATCGAGAAGGACTCTCCC
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| DNA Sequence for Gene |
>B381_19971
|sbcB
GTGAATTCAAGCATCTTCTGGTACGACTTCGAAACCACAGGGATCTCGCCCAGCCGCGACCGTCCGTTGCAGGTGGCGGGTATCCGCACCAACGAGGCGC TCGAGGAAATCGGCGAGCCACTGAACATCTATTGCCGCCCCTCGGACGATATCCTTCCGCATCCGGCGGCCTGCCTGGTCACTGGAATCACCCCGGCGAC CCTCGAGCAGAGGGGCGTGTGCGAGGCCGAGTTCATTCATCGTCTGCACCAACAGCTGTCGATGCCTGGCACCTGCGGCGCCGGTTACAACAGCCTGCGA TTCGACGACGAAGTGACGCGCTACAGCCTGTACCGCAACTTCTACGATCCTTACGCCCGTGAATGGCAGGGCGGCAACAGCCGCTGGGACCTGATCGATC TGATACGCACCGCCTATGCTCTGCGGCCGGAAGGCCTGATCTGGCCTGAAGAAGAGGGACGGGTGACGCTCAAACTCGAGCGGCTGAGCGTGGCCAATGG GCTGGAACATCTGAACGCGCACGACGCGCTATCCGATGTGCGGGCGACCATCGCCCTGGCCAGACTCATTCGTGATCGCCAGCCGCGGCTGTACGACTAT CTCTACAACCTGCGCCGCAAGCAGGCGGTGCTTGAGCAGATCCGGTTGCTGGAGCCCATGGTGCACGTGTCCGGCCGCTTCTCCGCTGCACGGCATTTTC TCTCTGTAGTCCTGCCGCTGGGCTGGCACCCGCGCAATCGCAACGCGCTGATCGTCTGCGATCTGCAGGCGGGACCGGAGCCGCTCTTGCAGGAAACGGC TGAAACGCTGCGCCAGCGCCTGTATACCCGACGTGACCAGCTCGCCGATGGCGAGTTGCCGGTGCCCTTGAAACTGGTGCACGTCAACAAGTGTCCCGTG GTGGCGCCGCTCAAGGTATTGCGCGCCGAAGACATCCAGCGCCTTGCTCTGGATATGTCGCTCTGTCATGAACGTGCGGCAATGCTTCGAGAACAGCGGC AGATCTGGAGCACCAAGCTCGAAGACATCTATCGCGAAGAGCGCTTCGCCGGCACCGATGATCCGGAGCAGCAGCTATATGATGGTTTTCTCGGGGAGCG GGACCGGCGGCTATGCGACCAGGTCCGTAGCCTGTCACCTGCGGAGCTGGCGAAACAGCCGTTTCGATTCGATGATGCCCGCCTCGAGGAGCTGCTATTT CGTTATCGCGCGCGCAACTTTCCCGAAGCGCTATCCGTCGACGAGCAAGCGCAATGGCGTCAGTTCTGCCAACAGCGGTTGAGCGATGGGGCATATGGCG CTCCCAACACGCTTGCGCAGTTCGAGTTGGATATCGAGCAATTCATGGTCGGTGCAACACCGGCGCAACGCCAACTGTTGCAGCAATGGCGCGAGCACGG TCAGGGGTTGCGTGAGCGTTACCGTTTGAGCAATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTTCGGGAGGGCGTATGTTTGCGCGCTACGCCTGACTCGCGCTGGGGAGGAAGAGTGCAGCACAAATAAAAACGCCGTTTCCCGACATCAATGATTAA TGTCGAGAAACGGCGTTCGTTATAAAACCGTAGCCGCTTAGCCGAGAAGGGTGGCCCAGCTTTCAACGGTGTCGGAGCCCCACTGGGCTTTCCATTCTTT CAGGGTCTTGTGATTGCCGCCTTTGGTTTCAATCACTTCACCGCTGTGTGGGTTTTTGTACTGCTTCACGCGGCGGGCACGCTTGCTGGTCGCGGGAGCT TTTGCAGCGCGCGGGCTCTTGCTGTTGCGAGAGGCCTCCGGATCGAGCAGGGCAATGATGTCGCGCAGGGACTTCTGGTATTCACCCATGAGTTCGCGCA GCTTGCCTTCGAATTCCAGTTCCTTTTTCAGCTTGTCGTCTTCGGACAGCGACTTCAGGCGCTCTTGAAGTTCCTTGATGGCTTCTTCAGTAGCGCGATA
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| Amino Acid Sequence |
>exonuclease I
MNSSIFWYDFETTGISPSRDRPLQVAGIRTNEALEEIGEPLNIYCRPSDDILPHPAACLVTGITPATLEQRGVCEAEFIHRLHQQLSMPGTCGAGYNSLR FDDEVTRYSLYRNFYDPYAREWQGGNSRWDLIDLIRTAYALRPEGLIWPEEEGRVTLKLERLSVANGLEHLNAHDALSDVRATIALARLIRDRQPRLYDY LYNLRRKQAVLEQIRLLEPMVHVSGRFSAARHFLSVVLPLGWHPRNRNALIVCDLQAGPEPLLQETAETLRQRLYTRRDQLADGELPVPLKLVHVNKCPV VAPLKVLRAEDIQRLALDMSLCHERAAMLREQRQIWSTKLEDIYREERFAGTDDPEQQLYDGFLGERDRRLCDQVRSLSPAELAKQPFRFDDARLEELLF RYRARNFPEALSVDEQAQWRQFCQQRLSDGAYGAPNTLAQFELDIEQFMVGATPAQRQLLQQWREHGQGLRERYRLSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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