Pseudomonas stutzeri NF13, B381_19224
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 437 | 605 | 2.3E-55 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 448 | 602 | 2.11943E-59 |
| Coils | Coil | Coil | - | - | 322 | 342 | - |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 434 | 605 | 4.3E-54 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 450 | 603 | 9.42E-48 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 71 | 605 | 1.7E-67 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 440 | 605 | 5.5E-50 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 445 | 601 | 6.1E-42 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 443 | 604 | 7.8E-47 |
| Coils | Coil | Coil | - | - | 392 | 412 | - |
| Coils | Coil | Coil | - | - | 5 | 36 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.