Strain | Pseudomonas stutzeri NF13 contig00088, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TACCGGCAAGGTACGGCGGGCACTGATCCGGGCGGCACGTCGTGGGGTGGATGTGCGCCTGCTGCTGACCAGTCGCAACACCGATCACCCGCCGGTGCGC TACGCCGGACAGCGCTTCTATCCGCGACTGCTGCGTGCGGGCGTGCGAATCCACGAATATCAGCCACACTTTTCCCACTTGAAAATGGTGCTGGTTGACG ACTGGGTCAGCGTCGGCTCGTGCAACTTCGATCACTGGAACCTGCGCTGGAATCTGGAGGCCAATCTCGAGGCCATCGACGCTGGGTTGAGTGCCCAGGT GCAGGCGTGCTTCGAGCGTGATTTCCAGGACAGTATCGAAATCGACATCAAGAGCTGGTACGGCAGACCGCTGCACCTGCGCCTCTACCAACGCATGTGG GGCTGGCTGGACCGGCTGCTGGTAAACATCTTCAACCGCGGTGGCTGAGGCCGCCGCGTCACGGAGCGAAGCTCCAAACCCGCGTGAAGAGGACGATCCA
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DNA Sequence for Gene |
>B381_17224
ATGGCGGCGAAGAACATTTTGATGCTGGTGGGGGATTACGCCGAAGACTACGAAACCATGGTGCCTTTCCAGGCGCTGCAGATGGTTGGCCATCGCGTGC ATGCCGTGTGCCCGGACAAGAAGGCCGGCGACAGTGTGCGCACCGCGATCCATGATTTCGAGGGCGACCAGACCTACAGCGAGAAGCCGGGGCACAATTT TGCGCTGAACTTCGACTTCGCCGACGTGCGGGCCGAAGACTACGATGCCCTGGTCATTCCCGGTGGCCGGGCGCCGGAATATCTGCGCCTGAACGAACAG GTGCTGGCGCTGGTGCGCGCGTTCGACGAGGCCAGGAAGCCGATCGCAGCCGTTTGCCATGGCGCGCAGCTGCTGGCCGCCGCGGGCGTGCTCAAGGGGC GTGCCTGCAGCGCCTATCCGGCCTGTGCACCCGAGGTGAAGCTGGCTGGTGGCGAGTACGTGGACATCGCCGTGGATCAGGCGCACACCGATGGCAATCT GGTCAGCGCTCCGGCATGGCCCGCCCATCCAGCGTGGCTGGCGGCATTCCTCGAGGTGCTCGGGACCCGCATCAGTCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATGCAGGCCTCACCCAAGCCCGCCGCGCAGACTGCGCGGCGGGTTTTTCATCCGTGAGGCAATGCCCTCGTGTCCGTGAGTGCCCCATGACCCAAGCAA AAGATCCTCTTCACGGCGTGACGCTGGAGGCCATCCTGGTTCAGCTGCATGCTCGCTTCGGCTGGGACGGCCTTGCCGAGCGCGTCGATGTCCGTTGCTT CAGCAATGAGCCGAGCATCAAGTCCAGTCTGAAGTTTCTGCGCAAGACGCCCTGGGCCAGGGCGAAAGTCGAAGCGCTGTACATCGCAGAACAGAAAACC GGTAACTAGTCCGTTCGCGAGCGCCGCCCCCTTGGGCATGCCGTTCGGCAAATACTTCCCGTCCCCACTCAAGTTCGCTTTGCGCCGTCCGACTCTTGTA ACAGATTGATTCGTCGTGACCGATGAATCGCATTTTTTCAGCGGATCGCTGCCAGGGAGTTCAGGCGATGAGAAACAACGGGCCGGTAAGCAACACCGAG
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Amino Acid Sequence |
>ThiJ/PfpI family protein
MAAKNILMLVGDYAEDYETMVPFQALQMVGHRVHAVCPDKKAGDSVRTAIHDFEGDQTYSEKPGHNFALNFDFADVRAEDYDALVIPGGRAPEYLRLNEQ VLALVRAFDEARKPIAAVCHGAQLLAAAGVLKGRACSAYPACAPEVKLAGGEYVDIAVDQAHTDGNLVSAPAWPAHPAWLAAFLEVLGTRISL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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