Pseudomonas stutzeri NF13, B381_16038
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00079, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTACAAAAAACCCCGGCTAGCCGGGGTTTTGCGTTTCTGCCGCAGATTCATTCGTCCGCAACCAGATTGGATCGGTCGTCCACCGCACCCGCGGCGATC AGGTGTTCGGCTTCGTCTTCCGGCACGTGGATGCTGGTGCCGTCGATATTCATCACCGACATGCGTGCCTGGGGATCGGTGGTGATGCGCACGTCCATCA GGGCGCTGCGGTGCGTGTTGCCGTTGATGACCACGGCGCAGGTGCCGGTGGTGGTGTCGATGTCTACGGTCATGATCTATCTCCCGAAGCGGTGCAAAAG CCGCGCGCGGTTCGCCCGGCGTTTCCATGTCGACCACGAACAGGGTGCATCCGTTGTGTCTGTTACTGGAAAAACAGACTTAAACGTTACGATATAACAT GTTAGATTCTCGTCCCGCGAAGCTGACACCGCTACCGGATGCCGGCGCACAGCCGTCTTCGGTTGCTTTGGAAGGCAACCACCACTGTCTGGAGAGTCAC
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| DNA Sequence for Gene |
>B381_16038
ATGAAACTGAAGCGTCATCCCCTGGCCTGGGCGATCAGCCTGGCCTTGGTTCCGGCTGCCTGGGCCGCCGAGCCGGTCGAACTGCAATCCGTCGTGGTCA GCGCCAGCGGCCTGGCCAAGCAGAGCCATGAGATGACCACACCGGCGGCCGTGATGGAGGGAGACGAACTGGTGCAGCGTCGTGAGGCGACGCTCGGGGA AACGCTGGAAAGCCTGCCTGGCGTGCGCTCCAGCAGCTTTGGCGCCGGTGCGGCGCGCCCGGTTATTCGCGGGTTGGATGGCGCACGGGTCAAGGTGCTG AGCGATGGCGTGGAACTGCTCGATGCCTCGACCATCAGCCCCGACCACGCAGTGACCAGCGAACCGCTACTGGCCGAGCGCATCGAGGTCCTCAAGGGGC CGGCAACCTTGCTCTACGGTGGCGGCGCCATCGGAGGGGTAGTCAATGTGATCGACAAGAAGATCCCCACCCGCGTCCCGGAGAAGGGCTACGAAGGCGA ACTGGAGCTACGCGCCAACAGCGTCGCCAACGAAGGGGCGGGGGTGTTCGGTATCACTGCCGGCAGCGGCAACTTCGCCGTGCGCGCCGAAGGCACCAAG CGCCAGGCCGACCCTTACGAAATTCCCGGTTCGCCGGACAAACAGGAAGGTTCCTACAACGACACCGACAGCTTCAATCTGGGCGCCAGCTTCATCGGCG AGCGCGGCTACATCGGTGCCGCCTACGGTGAGCAGAACAACCGCTACGGACTGCTGGCCCACGAGCACGCCGATTGCCATACCCATGGCAGCGACTGGCA CTGCGGTGGCCATGATGATCACGACGATGACGACGACCATGATCACGAACACGAACATGGCAGCGTGCCCTATGTCGACATGCGCCAGAAGCGCTGGGAT CTGCGTGGCGAGCTGAGCGATCCGCTGCCGGGCTTCGAACTGGCGCGGCTGCGCATCGGCCACAGCGACTACCAGCACAAGGAGATCGAAGGCGGCGAAG TGGGCACCCGCTTCAACAACGACGCCACCGATGCCCGTCTGGAGCTGACCCATCAGCCGCTGTTCGGCTGGCGCGGTGTGCTCGGCGCACAGACCCTGCG TCGCGACTTCGAAGCCCTCGGCGAAGAGGCCTATGTGCCGCAGACGCTGACCCGCAACCACGGCTTGTTCCTGCTGGAGGAATACACCGCTGGCGCCTGG CGCTACGAACTCGGTCTGCGCCACGAATGGCAGGACATCGATGCCGACGGCCGTCCGGATACCGATCACAGCGGCACCTCGATGTCCGCCGGTGCGGTCT GGACCTTCGCCCCGCAGTACTCGCTGGGCTTCTCGCTGACGCGTTCGCAACGCCTGCCCAGCGCAGAAGAGCTTTACGCCAACGGCCCGCATGCAGCGAC CCGCACTGTCGAACTGGGTAACGTCGACCTGGAAGAGGAAACCTCGCACAACGCCGAGATCACCCTGCGCAAGTTCGCCGGCCGCACGACCTTCAGCCTG AGCCTGTTCCGCAACGAGGTGGACGACTTCATCTACGCCGCCGACACCGGTAACGACATCGGTGGTGGCTACCGCGAGATCGAATACCGCCAGCAGGACG CCGTGCTCACCGGGGCGGAAGGGGAGGTGCGCTTCCAGGCGACCGACGCCACCGCCTTCACCCTGTTCGGCGACCACGTGCGCGGCAAGTTGCGCGACGG CGGCGGCGACCTGCCGCGTATCCCGGCCGATCGCCTGGGTGTGCGGGTGGAACAGAGCTTCACCCCGGCGCTCAACGGCCAGCTGGAGTTCTATCGGGTG CAGCGCCAGGACGAACTGGCCGACTACGAAAGCGAAACCGGTGGCTACAACATGCTGGGCGCCAGCCTGGGTTACAGCGGCGCGCTGAACCAGACCGATT ACCTGCTCTACCTCAAGGCCAACAACCTGCTGGACGAAAAGGCCCGCCAGCACACTTCCTTCATCAAGGATGAGGTGCTGCTGCCCGGGCGCAATCTGAC CGTAGGCGTGCGCCTGGCATTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGAGCAATTTTCCTGGCAGCAACTCACAAGGGCCGGCCGCTATTGCCGGCCCTTATTCGTCATGTAGTGGCGATGCGGCGCGCAGAACCTCGCGGTCA CGCGCAAGTACGTGGATGACGCGCTATCCTTGCGCCCCTCGATTGTTCCGTTGCGGGTGTCGGTCGCTGTCCGCGCTGGCGATGGAACGTCAGGACCAAC AAGGAAAACAAGTCCCATGAACGTCAGCACTCCCACTCTGATCACTTTCGTGATCTACATCGCGGCGATGATCCTGATCGGTTTCATCGCCTACCGCGCC ACCAAGAACTTCTCCGACTACATCCTTGGCGGCCGCAGTCTCGGCAGCTTCGTCACCGCGCTGTCGGCCGGTGCCTCGGACATGAGCGGCTGGCTGCTGA TGGGGCTGCCCGGAGCGATCTTCGTCGCCGGTCTGTCGGAAAGCTGGATCGCCATCGGCCTGATCGTCGGCGCCTGGCTGAACTGGTTGTTCGTCGCCGG
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| Amino Acid Sequence |
>TonB-dependent receptor protein
MKLKRHPLAWAISLALVPAAWAAEPVELQSVVVSASGLAKQSHEMTTPAAVMEGDELVQRREATLGETLESLPGVRSSSFGAGAARPVIRGLDGARVKVL SDGVELLDASTISPDHAVTSEPLLAERIEVLKGPATLLYGGGAIGGVVNVIDKKIPTRVPEKGYEGELELRANSVANEGAGVFGITAGSGNFAVRAEGTK RQADPYEIPGSPDKQEGSYNDTDSFNLGASFIGERGYIGAAYGEQNNRYGLLAHEHADCHTHGSDWHCGGHDDHDDDDDHDHEHEHGSVPYVDMRQKRWD LRGELSDPLPGFELARLRIGHSDYQHKEIEGGEVGTRFNNDATDARLELTHQPLFGWRGVLGAQTLRRDFEALGEEAYVPQTLTRNHGLFLLEEYTAGAW RYELGLRHEWQDIDADGRPDTDHSGTSMSAGAVWTFAPQYSLGFSLTRSQRLPSAEELYANGPHAATRTVELGNVDLEEETSHNAEITLRKFAGRTTFSL SLFRNEVDDFIYAADTGNDIGGGYREIEYRQQDAVLTGAEGEVRFQATDATAFTLFGDHVRGKLRDGGGDLPRIPADRLGVRVEQSFTPALNGQLEFYRV QRQDELADYESETGGYNMLGASLGYSGALNQTDYLLYLKANNLLDEKARQHTSFIKDEVLLPGRNLTVGVRLAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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