Pseudomonas stutzeri NF13, B381_14121 (motB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00061, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGACCGCGTTCGTCTGCGATTATTTGCGTATCATGTCATCGGGCAACATGGCACCGCATGAGCTCGAAGGCCTGTTCGACATGGAAATATCCAGCCTGAA GGAAGAGCTGGAGCATCCTTCTCATGCGGTCAGCAAGATTGCGGACGGGTTGCCGGCTATGGGTATCGTCGCCGCCGTTCTGGGCATCGTGATCACCATG TCGATCCTTGCCGAAGCGTCGAATGCCGAGATCGGTGAAAAGGTCGCTACGGCCTTGGTGGGTACGTTCCTGGGTATTCTGGCGTCCTATGGCTTCTTCG GTCCGCTGGCTGGCGCGCTGGAGCACGATGCCAAGGAAGAGCTGAACGTCTATGAGGCGATCAAGGCGACGCTGGTCGCTTCGGCCTCGGGCATGCCGCC GACGCTGGCCGTCGAGTTCGGGCGCAAGGTTCTTTATCCCGCGCACCGCCCGAGCTTCGCCGAGCTCGAACAAGCCATGCGTGGCGCCTAAAGGTTCACC
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| DNA Sequence for Gene |
>B381_14121
|motB
ATGGACAACACCCAACCGATCATCGTCAAGCGGGTCAAGAAGGTCGCGGGCGGCCACCACGGTGGCGCCTGGAAGATCGCCTTCGCCGACTTCGCAACCG CGATGATGGCGTTCTTTCTGGTGATGTGGCTGATGAGCTCGGCGACGCCAGAGCAGAAGAAACTCATCTCCGGCTACTTCCAGGATCCGATCGGCTTCAC CGAGAGCGCCAGCCCGCACGTCATCGACCTGGGCGGCACGCCGACCCCCTCGCCGGATCGCACCCTCAACGCTGAGCTGGAACCGGCCCAGAGCGAAGCG CAGGTCGACAGCGATCAGGTGGAAACCTTTGCCGAACAGCTGGAGCGTGAACGCCTCGATCTGCTGTTGCAGGAGCTGCAGAACAAGGTCGACGAGAATC CCGAATTGCAGAAGTTCAAGGACCAGATTCTCTTCGAGATCACCCAGGACGGCCTGCGCATACAGATCATGGATGCCGAGAACCGGCCCATGTTCGCCCT CGGCAGCGCCCAGTTGCAGCCCTACTTCGAAGACATCCTGCTGGCGCTGGTCGACACCATCGCCGCGGTGCCGAACAAGATCAGCATCAGCGGGCACACC GATGCCAAGCCTTACTCGGGGCGCGGCGACTTCGGCAACTGGGAACTCTCGGCCGGACGCGCCAATGCCGCACGCCGCACGCTGGTGATCGGTGGTTACC CGGAAGATCAGATCGCGCGAGTGGTGGGCTACGCCTCGTCGGCACTGTTCGATCGCGAGGCCCCGTTCAACCCGGTCAACCGGCGCATCGACATTCTGGT GCTGACCAAGAAGGCGCAGCGTTCGATCGAAGGTGAGCAGCCCGCTGCCGTGGATTCATCCGATGCGGCCGAAGCCACGGACGCCCCGCCGGCTACGACT GAACCGTTGCAGCCGCAGCAACTGCGGGAGCGGCTGAATATCTTCGAAGATGGCGTGCTGCAGTTCAGTCAGCCCGGCGAGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCCAGGTCAGTAATCCGGCTCTGGCAGGCTGCTGAGAATGTGTCGGTAGCTGCTCATGCGTTGTGGCTGGATGCGCCCGTCTTCCAGCGCCTGGAGCA GCGCGCAGCCAGGTTCGCGATCATGCTTGCAGTCGCGGAAGCGGCAGTGCCCGAGCAGATCCTGGAATTCGATGAAACCCGCTTCGACGTCGGCACGGCT GACATGGCCGAGGCCGAATTCGCGGATGCCGGGGGAGTCGATCAGCTCGCCGCCACCGGGAAAGTGGAACAGGCGTGCCGTGGTGGTGGTGTGGGTGCCT TTGCCGGTCATTTCCGACAGCGCCCCGACGCGGGTGTCGACACCCGGCAGCAGGCTGTTCACCAACGAAGACTTGCCTACCCCGGATTGCCCGACGAAGA CGCTTACGTGGCCGTCGAGCCGCGCCTTGAGCGCATCCATGCCGCCACCACCGTGGGCCGAAACTTCCAGCAAGGGGTAGTTCAGCTGCCGATAGACCTC
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| Amino Acid Sequence |
>flagellar motor protein MotB
MDNTQPIIVKRVKKVAGGHHGGAWKIAFADFATAMMAFFLVMWLMSSATPEQKKLISGYFQDPIGFTESASPHVIDLGGTPTPSPDRTLNAELEPAQSEA QVDSDQVETFAEQLERERLDLLLQELQNKVDENPELQKFKDQILFEITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVDTIAAVPNKISISGHT DAKPYSGRGDFGNWELSAGRANAARRTLVIGGYPEDQIARVVGYASSALFDREAPFNPVNRRIDILVLTKKAQRSIEGEQPAAVDSSDAAEATDAPPATT EPLQPQQLRERLNIFEDGVLQFSQPGEG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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