Strain | Pseudomonas stutzeri NF13 contig00061, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATCCGATCGTGGTTCACCGCCCAGACGTAGATCAGCCAGTTGGCGGCGATCAGCACGCTGGAGATGCCGAGCACGCCAAGCCGCCGCGGGTGCGCCAGCA GTTCGCGCCACCAGCCGGGGTGGCGCCAGACCAGCAGCACCAGCGAGCCGAACACCGCCGACCAGATCACCCGCTGGGTGACGATCTCCAGTGCACCGTA TTGCTCGAGTGCCTTGAAGTAGAGCGGGAACATACCCCAGATGCTGAACGTGGCCAGCCCCAGCAGATAACCCTTGCGCAGATTGGCGGTAGCCATGACG TCCTTCGACGAGCAGCGGAGAGCCGGCCATTTTGCGCCTTTGTCCGGAGGAGAGAAAGATTAGGCGGCTAACGTAAAGCCACGACGCGACCAGCTGCGCC GATCTGGCGGATGAGGGAACGCGCGAAGGCTCGTTCCGTCTCATCTGCATCGCCAATCGAAACGGCGTCGCGTTCAGGCGACGTGCCTACGGAGGTCGCA
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DNA Sequence for Gene |
>B381_13551
ATGCGCTTGCAGAATCAGGTGGCTCTGGTCACCGGCAGTACCCACGGCATCGGCCTCGGCATCGCCCTGCGCCTGGCCGAGGAGGGGGCTGACGTGGTCA TCAACGGTCGCGAGGAAGATGACGAGGCCCGTGCGAGCCTGGAACAGGTACGCGCCGTCGGACGGCGGGTCTGCTTCATCGCCGCGGACGTCAGCCAGGT CGAACAGTGCCGCTGGCTGGTGCACGGGAGCGTCGAGCGCATGGGCCGCCTGGATATCCTGGTGAACAACGCCGGGGTGCAGACGCATGCTGCATTTCTC GACGCCGAGGAAGACGACTACGATCGGGTACTCGACGTCAACCTGCGCGGGCCGTTCTTCCTCGCCCAGGCCTTTGCCCGCTATCTGCGCGAGCAAGGCC GTGGCGGGCGCATCATCAACAACAGTTCGGTGCACGAGGAATTGCCGCACCCCAACTTCACCGCCTACTGTGCGAGCAAGGGCGGGCTGAAGATGCTCAT GCGCAACATCGCCATCGAACTCGCGCCGCTGGGCATCACCGTGAACAACGTGGCACCCGGCGCCGTGGAAACGCCGATCAACCGCGAGCTGATGAACCAG CCGGAGAAACTCGCCAGCCTGCTACAGAACATCCCCGCCGGGCGCTTGGGCAGGCCGCACGACGTGGCCGGGGTCGTCGCCTTTCTGGCCTCGCCGGATG CCGAGTACATCACCGGGACTACCCTGGTGGTCGATGGCGGTCTGCTATGGAATTACAGCGAACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCAGTAGCCAGTCATACCAGCCGTTCAGCCATGACGTCAGCACCATCTCGCTGGCCGATACCCTCAGCCCCGCCGATCGCTATCAGGAGCTGTTCGTCGC CGTGCAGATGCAGCGGGTGTTTGCCGACAGCAAGACCTTCGTCGACTGCGCGCCGCGACGCGATCCCGAAGCCATCCTCGAGGCCTACCGAGCCCGCTGC AACGAGCCGGGCTTCGATCTCGGCGCCTTCGTCCACGAGCACTTCAGCCTTTACGAGATGCCGGCCAGGGAGTTCGTCGCCAATCCCGACGACAGCCTGG CCGAACACATCGACCGGCTCTGGCCGGTGCTTACCCGGCAGCCGCAGGACCATCCCGAGCATTCCTCGCTGCTGCCGCTGCCGCACCCGTATGTGGTACC GGGTGGGCGCTTCACCGAGCTGTACTACTGGGATTCCTACTTCACCATGCTCGGCCTGGACGAGAGCGGGCACTGTGACCTGTTGCGCTCGATGGCGGAC
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Amino Acid Sequence |
>short chain dehydrogenase/reductase family oxidoreductase
MRLQNQVALVTGSTHGIGLGIALRLAEEGADVVINGREEDDEARASLEQVRAVGRRVCFIAADVSQVEQCRWLVHGSVERMGRLDILVNNAGVQTHAAFL DAEEDDYDRVLDVNLRGPFFLAQAFARYLREQGRGGRIINNSSVHEELPHPNFTAYCASKGGLKMLMRNIAIELAPLGITVNNVAPGAVETPINRELMNQ PEKLASLLQNIPAGRLGRPHDVAGVVAFLASPDAEYITGTTLVVDGGLLWNYSEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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