Pseudomonas stutzeri NF13, B381_12878
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00058, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCACCGACCTCCGAAGAGGTATCAGCCGATGTGGTCGATGAGGATACCCGTGCCAAGGCGCTCTCGTGTCGTGTGCTCATAGTCGACGACTCGTCTG TAGCGCGTAAGCAGATTGCTCGCTGCCTGGAAAATATCGGTATCGAGGTCGTCAAGCTTAATGATGGACGCGAAGCTCTCAACTATCTGAAGCGAATGGC TGACGAGGGCAAGAAGCCTGCTGAAGAGTTTCTGATGATGATTTCCGATATTGAAATGCCGGAAATGGATGGCTATACCCTGACTACCGAGGTACGGCAC GATCCGCGCATGCAAGGTATGCATATACTCCTGCATACTTCCCTCTCCGGTGTGTTCAACCAGAACATGGTGAAGCGGGCGGGGGCGGATGATTTTCTCG CCAAGTTCCAGCCTGACGATCTCGCTGCTCGAGTGGCCGAGCGAATCAGGCAGGCGGATGCAAACTGAGGCTAGTTCCTCTCATGATGGTGAGGCTTTGA
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| DNA Sequence for Gene |
>B381_12878
TTGGTGTCAGTCGATCTGGATTTCGAGCAGTTCCGGGTATTTCTTGAAAAGACGTGCGGCATTCTGCTGGGCAGTAACAAGCAGTATCTGGTGTCCAGTC GGCTGAACAAGCTGATGGAACAACAGGGCATCAAGACGCTGGGCGATCTGGTTCGGAAGATTCAGGCACAGCCACGCAGCGGGCTTCGGGAGTTGGTCGT CGATGCGATGACGACCAACGAAACGCTCTGGTTTCGTGACACCTATCCTTTCGAAGTGCTCAAAAGTCGCGTGCTGCCAGAGATGCTCAAGGCTGGGGCA GGGCAGCGTCTGCGAATATGGTCGGCGGCATGCTCGTCCGGGCAGGAGCCGTATTCGCTGTCGATGTCCATCGATGAGTACGAGCGCAGCAATCCCAGTC AGGCGAAAACCGGCGTGCAGATCGTAGCTACCGAACTGTCGGGCGCGATGCTCGCGGCGTGCAAGGCGGCAGAGTACGACAGCCTGGCAATTGCTCGCGG TCTGTCCAGTGACCGCCTGCAGCGCTACTTCGATGTAAAGGCGCCGGGGCGATGGGCGGTCAAGCCCGCGATCCGTTCGCGTGTCGAGTTCAGGGTGCAG AATCTGCTCGATAGCTATGCCGCGCTGGGCAAGTTCGACATCGTGTTTTGCCGCAATGTGCTGATCTATTTTTCCGCTGATGTGAAGAAGGATATTCTCA AGCGCATTCATGCGACATTGCGCCCGGGCGGCTATCTGTTTCTTGGCGCATCCGAAGCGCTCAATGGCCTGCCGGAGCTTTATCAGATGGTCCAATGCAG TCCGGGGATCATCTACAAGGCGAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGCATCACGCCGGCGGCAGAAAACCGTCATGCAACATGACGGATGCGGCAAAAAAGCGGTAAAGCCTTGCCGCTTTTGACGCCCTCTAGCCGAGAGTT CTCTCGCTAGCCTCCTGAAATCAAAGAGTTACGTTCAGTGGCATGAGCTTTGCTGGTGTTTGCGTAAGCAGACTTGTATCCGGCAGAGGGCCAGATCATG AGCATCAGTTTCGATAAGGCATTGGGTATACACGAGAAGGCGCTCGGTTTTCGCTCGCAGCGCGCTGAAGTGCTGGCGAACAATATCGCCAACGCCGACA CGCCCAATTACAAGGCTCGTGACTTGGACTTCAGCAGCGTGCTTGCCGAGCAGTCCGCTCGCAGCCAGGGCGGATTCGAGGTGGCGCGGACCAGTGACAA GCATATCGCCGCCGAGGGGTTGGAGATTGCCGATGCCTCGTTGCGCTTCCGCACCCCCGCACATCCCTCGCTTGACCAGAACACTGTCGATCTGCAGATC
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| Amino Acid Sequence |
>chemotaxis protein methyltransferase CheR
MVSVDLDFEQFRVFLEKTCGILLGSNKQYLVSSRLNKLMEQQGIKTLGDLVRKIQAQPRSGLRELVVDAMTTNETLWFRDTYPFEVLKSRVLPEMLKAGA GQRLRIWSAACSSGQEPYSLSMSIDEYERSNPSQAKTGVQIVATELSGAMLAACKAAEYDSLAIARGLSSDRLQRYFDVKAPGRWAVKPAIRSRVEFRVQ NLLDSYAALGKFDIVFCRNVLIYFSADVKKDILKRIHATLRPGGYLFLGASEALNGLPELYQMVQCSPGIIYKAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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