Pseudomonas stutzeri NF13, B381_09731
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00045, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGCTCCTGGCGTTCCTGGTGCTGGCGGCGCAATACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTCTCGGCGATCA CCGGGGTGATCCTGGCCGGTAGCGACAACAACGTGTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCCATCCTCATCGTCGA GTTCGCCAAGGACAAGCAGGAGGAAGGCATGGACCGGCTGGCCGCCATCCTCGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCAGCTTCGCC TTCATCATGGGCGTGGTGCCGCTGGTGCTCTCCAGCGGGGCCGGCGCCGAGATGCGCCATGCCATGGGTGTTGCGGTGTTCAGCGGCATGCTTGGGGTGA CCTTCTTCGGTCTGCTGCTGACCCCGGTGTTCTATCTGGTGATTCGTGCCTTCGTCGAGAAACGCGAAGCCCGCAAAGTGGCTTACAAGGAGGCCCGCGC
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| DNA Sequence for Gene |
>B381_09731
ATGAAGTTCTTTGCCCTTTCCCTGCTCACTCTGGCACTGAGCGCCTGTGCGGTCGGCCCCGATTACCGGGCACCGCAGCCGGAACCGGCGCGTATCGGCG GCGCATCGGCTGGCGACTACGACCGCTCGCGCTTCGAAGCGGCCTGGTGGCAGCAGTTCGACGATCCGACGCTGGACGCCCTGGTTGGCGAAGCCCTGGC CGAGAACCGCGAACTGCGCATCGCCTATGCCCGCCTGCGGGCGGCACGGGCGATTCGCGATGACGTCAGCAATGATCGTCTGCCCACCGTCACCGCGGGC GCCAGCGCCGATATCGGCAAGGCCCAGCAACCGGGTTTCAGTGAAGAGCGGGTGAACGCCGAGCGTTACGATCTGGGCCTGGACATGGCCTGGGAACTGG ACCTGTTCGGCCGTATCCAGCGCCGCCTGGAATCCAGCGAGGCGCAGGCCGATGCCGTCGAAGCCGAGCTCTACCAGCTGCAGGTCAGCCTGATCGCCGA GCTGGTGGATGCCTACGGTCAGCTGCGCGGTGCCCAACTACGCGAGCGGATCGCCCGCGACAACTTGGCCAACCAGCGCAATTCCCATGAACTGACCGAG CAGCTGCGCGAAGCGGGCGTCGGTAGTGAGCTGGATGTCCTGCGCGCCGATGCCCGTCTGGCGGCCACCGAAGCCAGCCTGCCGCAATTGCAGGCGCAGC AGGCGCGTGCGCGCAACCGCATCGCTACTCTGCTCGGCCAGCGCGCCGATCAACTCGCCGTGGACCTCGCTCCGCGCGATCTGCCGGCAATCGCCAAGTC GCTACCGATTGGCGATCCAGGCGAGCTGCTGCGCCGGCGCCCGGACATTCGTGCAGCAGAGCGCCAGCTGGCCGCGGCCACTGCCGATGTCGGCGTGGCG ACAGCCGATCTGTTTCCGCGCGTGAGTCTGTCGGGCTTTCTCGGCTTCGTTGCCGGGCGCGGCTCGCAGATCGGCTCCAGCGCAGCGCGGGCCTGGGGCG TGGCGCCGAGCATCAGTTGGGCAGCGTTCGACCTCGGCAGCGTGCGGGCCCGCCTGCGTGGCGCCGAGGCCGACGCCGATGCGGCGCTGGCCAGCTATGA GCAACAGGTATTACTGGCGCTGGAGGAATCTGAAAACGCCTTCAGCGATTACGCCAACGCCCAGCAGCGCCTGCTCTCCTTGATCCGCCAATCGACGGCC AGCCGCGCCGCCGCACAGCAAGCGGAAATCCGCTATCGCGAAGGCACGGCGGACTTTCTCGTACTGCTCGATGCCGAGCGCGAACGACTTCTGGCCGAAG ACGCTCAGGCTCAGGCCGAAGTCGAGCTCTACCGCGGCGTGGTTGCCATCTACAAGGCCCTCGGTGGCGGCTGGACGCCGAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TACCGGCTCTCTCGTTGGATCGCCTCCTGGTCGATCACTTCTGCCCCGGGTGCGGCAACGCCACGGGGCATTTTTTGCCTGTTCGGCAGCACGCAATCCA GTCGACCACCTTGGGGGCTGAACGCCTCAGCCATTTCCCGCAACGTACGCTCCCGATGAATGCGCCGGGATAGCGCTATCGTCGCCCTGTTTGTATTGTC GGAGCCGGGCAACCACCTCTTGCCTCTTAATCCGGTCTGACTCTGATGCCCCTAGAAGCGTTCATGAATACATCGGTATCCAGCCAGGTCGAGCAGGTAC TGGCCCTGCTGCAGCGTCACCTGGGCGGGAACCTGCTGGCCGTGCATCTGTTCGGCTCGGCCGTTGTCGGTGGGCTGAAACCCGGCAGCGATCTCGACCT GCTTGTTACGGTTGCAGCCCCCCTGCCGGAGGCCACGCGCCGCACAGTCATGGACGAGCTGCTGATGCTTTCCGCCTGGCCGGCCAGCGAGCGTCTGCGT
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| Amino Acid Sequence |
>outer membrane protein OprN
MKFFALSLLTLALSACAVGPDYRAPQPEPARIGGASAGDYDRSRFEAAWWQQFDDPTLDALVGEALAENRELRIAYARLRAARAIRDDVSNDRLPTVTAG ASADIGKAQQPGFSEERVNAERYDLGLDMAWELDLFGRIQRRLESSEAQADAVEAELYQLQVSLIAELVDAYGQLRGAQLRERIARDNLANQRNSHELTE QLREAGVGSELDVLRADARLAATEASLPQLQAQQARARNRIATLLGQRADQLAVDLAPRDLPAIAKSLPIGDPGELLRRRPDIRAAERQLAAATADVGVA TADLFPRVSLSGFLGFVAGRGSQIGSSAARAWGVAPSISWAAFDLGSVRARLRGAEADADAALASYEQQVLLALEESENAFSDYANAQQRLLSLIRQSTA SRAAAQQAEIRYREGTADFLVLLDAERERLLAEDAQAQAEVELYRGVVAIYKALGGGWTPSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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