Pseudomonas stutzeri NF13, B381_08190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00040, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTGGCATTATCCCTATGCGTTTAACTACAGCAAGCAAAGACCGCCGAATGGAGCGCTAGTTCGGCGCGCAGTACGCCTGCCTGCACCGGAGCACCTGT CATGGCCGACCTTCCACCACTGCTGCCACCCGCTGCCGACGCCGATGCACGGCGTGCCGCTGTTTATCTGGTGATGTCGCAGATACCGCCTTGTAAGGTG GTGAGCTACGGCGAACTGGCCGCCATGGCCGGACTCGGTCGCGCGGCCCGCTGGGTTGGCCGGTTGATGTCTCAGCTGCCCGACGGCACCAGCCTGCCCT GGCACCGGGTGATCGCCGCCGGCGGACGGCTCAGCCTGCCGGCCGGTACCCCTGCCGGGCACGAGCAGCGCATGCGCCTGCGGGCCGAAGGGCTGACCAT CATCAACGACCGGGTGGACATGCGTCGGCACGGCTGGCATTCGACGGAGCACAGCGGTTAGAGTGCGCGCTTCGTCCAAAACTGCACAGATCCTCGATGT
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| DNA Sequence for Gene |
>B381_08190
ATGTCCCGTGAAACCTGGCGCGATGCGCTAGCCGCCTACGCCAGCCCCGCTACGCTGGCCCTGCTGTTGCTGGGTTTCGCTGCGGGTCTTCCCGCCGTTC TGGTGTTCTCCACGCTGTCGGTCTGGCTGCGCGAAGCGGGCGTCTCGCGGGAAACCATCGGCTTTGCCAGCTGGATCAGCCTGGCGTATGCATTCAAATG GGTCTGGTCGCCGATGCTCGACCAGTGGCGACTGCCCTGGATCGGCGCGCTCGGGCGCAGACGCTCCTGGCTGGTGCTGTCGCAGGCGCTGATCGCCATC GGCCTGGTTGGCATGGCCCTGTGCAACCCGCAATACAACCTCACGATGCTCATCGCGCTGGCGGTGGTCGTGGCGTTTTCGTCGGCCACCCAGGACATCG CCATCGATGCCTATCGCCTGGAGATTGCCGAGGACAAGCTGCAGGCGACCCTTGCAGCCAGCTACATGACCGGCTATCGCATCGCCATGCTGCTCGCCAG CGCCGGCGCGCTCTTTCTCGCCGAGTGGCTGGGCTCGAGCAGCCTCGACTACAACCAGGCAGCCTGGACCACGACCTATCTGGCCTTCGCCCTGTTGATC CTTCCGGGGTTGATCACCAGCCTGGTGATCCGCGAGCCGGACGCCGCCCCGCCGCTGCCCAACGAGCCCTCGCGCTACAGCTTCAATCACCAGCTCGCTG CAGTCGGTCTGCTGCTGGTGCTGCTGATCTCGATACCGGCGATGATCAACGCACTGATCGCCCAGGCCTGGCCGCGAGCGACGCTGTATGCACTATTCAT CCTCGGCAGCATTTCGCCGATGGGCCGGGCGCTGTTCGTGCCGGTGCGCCATATCTTCAGCCAAGCCAAGCAACGCCAGCGACCGGCGCGCTTCGACTTC GCCCACCAGGCGGTATCGGTGATCGTGCTGATCATCCTCATGGTGTCGACCACCGGCATGTTCCAGTCCTACTGGGGCGGTTACTGGCCGCGCGGCACCA TGTACCTGCTGATCTGCTGGGGCTGCCTGTCGGCACCTGGGCGCATCCTGATGGGGCCGGTGCTGACGCCGATCACCGACTTCATCCTGCGCTACCGCTG GCAGGCGCTGCTGCTGTTGGGGCTGATCGCCACCTACCGAATGTCGGATACGGTGATGGGCGTGATGGCCAACGTGTTCTACATCGATCAGGGTTTTTCC AAGGACGAGATCGCCAGCGTCAGCAAGCTGTTCGGTCTGGTGATGACGCTGCTCGGCGCGGCCTTCGGCGGCTTGCTTATCGTGCGTTTCAGCATCCTGC CGATCCTGTTCATCGGCGGAGTCGCCTCGGCAGCGACCAACCTGATGTTCATGCTGCTGGTCGAGATGGGCGCGAATCTGAACATGTTGATCGTCACCAT CTCCTGCGACAACTTCAGCGGCGGCCTCGCCTCCACCGCCTTCGTCGCCTACCTGTCCAGCCTGACCAACCTGAAGTTCTCGGCCACCCAATACGCCCTG CTGAGTTCGCTCATGCTGTTACTGCCCCGTCTGCTGGGTGGCTACTCCGGGGTCATGGTGGAACACCTCGGCTACAGCGACTTCTTCCTGGTCACCGCGT TGCTCGGCGTGCCGACGCTGATTCTGATCGTCTGGCAGTGGCGCAGAACCCGCCAGCAGCCGGACGACACGCCGCACGAAACAGCCTCCGAACATTCCTG A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGAAAAACAGAAACGACGAAGCCGGCAAATGCCGGCTTCGCTTCGTTCAGGCAAGACCTCAGCTCTGAACCAGGTGCACCACGCGCTGCGGAAACGGA ATGCCGATCCCCGCCTCGTCGAAACGCTCCTTCACCAGTTCGGTGAAACCGAAGGTCACCGGCCAGAAATCACCGGTCGCGACCCAGACTCGCAACGACA GATTGACCGAGCTGTCCCCCAGTCCAGTGACGAATACCACCGGCTCGGGATCGCGCAACACGCGCTCGTCCTGCGCGATTTCCAGCAGTATCTGCCGCGC CAGCTTGACGTCCGCGCCGTAATCGATGCCGACGTTGATATCGGCACGACGCCGCGGTTCGCGGGAGTAGTTGGTGATATGACCGTTGGACAAACTGCCG TTGGGCACCACGATGGTCTTGTTGTCGGCAGACTTGAGCACCGTATGGAATATCTGGATGGAATGCACTGTGCCCGCTACGCCCTGGGCTTCGATCCACT
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| Amino Acid Sequence |
>muropeptide permease AmpG
MSRETWRDALAAYASPATLALLLLGFAAGLPAVLVFSTLSVWLREAGVSRETIGFASWISLAYAFKWVWSPMLDQWRLPWIGALGRRRSWLVLSQALIAI GLVGMALCNPQYNLTMLIALAVVVAFSSATQDIAIDAYRLEIAEDKLQATLAASYMTGYRIAMLLASAGALFLAEWLGSSSLDYNQAAWTTTYLAFALLI LPGLITSLVIREPDAAPPLPNEPSRYSFNHQLAAVGLLLVLLISIPAMINALIAQAWPRATLYALFILGSISPMGRALFVPVRHIFSQAKQRQRPARFDF AHQAVSVIVLIILMVSTTGMFQSYWGGYWPRGTMYLLICWGCLSAPGRILMGPVLTPITDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFS KDEIASVSKLFGLVMTLLGAAFGGLLIVRFSILPILFIGGVASAATNLMFMLLVEMGANLNMLIVTISCDNFSGGLASTAFVAYLSSLTNLKFSATQYAL LSSLMLLLPRLLGGYSGVMVEHLGYSDFFLVTALLGVPTLILIVWQWRRTRQQPDDTPHETASEHS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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